RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 GABRG1Q8N1C3 465 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 OR4S1Q8NGB4 309 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 OR56B1Q8NGI3 324 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 ST6GAL2Q96JF0 529 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 DMRTB1Q96MA1 342 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 ZNF75AQ96N20 296 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 PROCRQ9UNN8 238 aa11.16□□□□□ -0.62
TRIM40-206ENST00000376724 GTF3C1Q12789 2109 aa11.15□□□□□ -0.62
TRIM40-206ENST00000376724 M0QYG6 137 aa11.15□□□□□ -0.62
TRIM40-206ENST00000376724 ARPC1BO15143 372 aaKnown RBP11.15□□□□□ -0.62
TRIM40-206ENST00000376724 TOXO94900 526 aa11.15□□□□□ -0.62
TRIM40-206ENST00000376724 AGFG2O95081 481 aa11.15□□□□□ -0.62
TRIM40-206ENST00000376724 HTR3BO95264 441 aa11.15□□□□□ -0.62
TRIM40-206ENST00000376724 CYB5AP00167 134 aa11.15□□□□□ -0.62
TRIM40-206ENST00000376724 HOXC12P31275 282 aa11.15□□□□□ -0.62
TRIM40-206ENST00000376724 ALDH3B1P43353 468 aa11.15□□□□□ -0.62
TRIM40-206ENST00000376724 FUT6P51993 359 aa11.15□□□□□ -0.62
TRIM40-206ENST00000376724 ATP1B3P54709 279 aa11.15□□□□□ -0.62
TRIM40-206ENST00000376724 TMEM50BP56557 158 aa11.15□□□□□ -0.62
TRIM40-206ENST00000376724 TAS2R19P59542 299 aa11.15□□□□□ -0.62
TRIM40-206ENST00000376724 CISD2Q8N5K1 135 aaKnown RBP11.15□□□□□ -0.62
TRIM40-206ENST00000376724 GVQW1Q8N7I0 195 aa11.15□□□□□ -0.62
TRIM40-206ENST00000376724 BEST4Q8NFU0 473 aa11.15□□□□□ -0.62
TRIM40-206ENST00000376724 GIMAP1Q8WWP7 306 aa11.15□□□□□ -0.62
TRIM40-206ENST00000376724 STARD4Q96DR4 205 aa11.15□□□□□ -0.62
TRIM40-206ENST00000376724 CPNE2Q96FN4 548 aaPredicted RBP11.15□□□□□ -0.62
TRIM40-206ENST00000376724 ARHGAP5-AS1Q96IT6 56 aa11.15□□□□□ -0.62
TRIM40-206ENST00000376724 PLSCR4Q9NRQ2 329 aa11.15□□□□□ -0.62
TRIM40-206ENST00000376724 CRIM1Q9NZV1 1036 aa11.15□□□□□ -0.62
TRIM40-206ENST00000376724 ZNF629Q9UEG4 869 aaPredicted RBP11.15□□□□□ -0.62
TRIM40-206ENST00000376724 CEP295Q9C0D2 2601 aa11.15□□□□□ -0.62
TRIM40-206ENST00000376724 ANKRD11Q6UB99 2663 aaPredicted RBP11.15□□□□□ -0.63
TRIM40-206ENST00000376724 MBD3L4A6NDZ8 208 aaPredicted RBP11.14□□□□□ -0.63
TRIM40-206ENST00000376724 MBD3L3A6NE82 208 aaPredicted RBP11.14□□□□□ -0.63
TRIM40-206ENST00000376724 MBD3L5A6NJ08 208 aaPredicted RBP11.14□□□□□ -0.63
TRIM40-206ENST00000376724 CSTBP04080 98 aaKnown RBP11.14□□□□□ -0.63
TRIM40-206ENST00000376724 CSN2P05814 226 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 ZNF14P17017 642 aaPredicted RBP11.14□□□□□ -0.63
TRIM40-206ENST00000376724 GABRR1P24046 479 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 SSBP1Q04837 148 aaKnown RBP11.14□□□□□ -0.63
TRIM40-206ENST00000376724 PRDX4Q13162 271 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 CXorf67Q86X51 503 aaPredicted RBP11.14□□□□□ -0.63
TRIM40-206ENST00000376724 OR51S1Q8NGJ8 323 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 MBD3L2Q8NHZ7 208 aaPredicted RBP11.14□□□□□ -0.63
TRIM40-206ENST00000376724 CCDC120Q96HB5 630 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 METTL9Q9H1A3 318 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 RANGRFQ9HD47 186 aaPredicted RBP11.14□□□□□ -0.63
TRIM40-206ENST00000376724 IFT46Q9NQC8 304 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 FAM215AQ9Y5M1 114 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 FIGNL2A6NMB9 653 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 ZNF736B4DX44 427 aaPredicted RBP11.14□□□□□ -0.63
TRIM40-206ENST00000376724 WDR1O75083 606 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 CNOT4O95628 575 aaKnown RBP11.14□□□□□ -0.63
TRIM40-206ENST00000376724 RAB3DO95716 219 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 MELTFP08582 738 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 TRAPPC2P0DI81 140 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 TRAPPC2BP0DI82 140 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 HIST1H1DP16402 221 aaKnown RBP11.14□□□□□ -0.63
TRIM40-206ENST00000376724 BLVRBP30043 206 aaPredicted RBP11.14□□□□□ -0.63
TRIM40-206ENST00000376724 RRAS2P62070 204 aaPredicted RBP11.14□□□□□ -0.63
TRIM40-206ENST00000376724 KRTCAP3Q53RY4 240 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 C1orf185Q5T7R7 199 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 OR52W1Q6IF63 320 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 CCDC28AQ8IWP9 274 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 BATF2Q8N1L9 274 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 TMEM229BQ8NBD8 167 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 STEAP2Q8NFT2 490 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 WBP1Q96G27 269 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 FYTTD1Q96QD9 318 aaKnown RBP11.14□□□□□ -0.63
TRIM40-206ENST00000376724 GINS4Q9BRT9 223 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 TINAGL1Q9GZM7 467 aaPredicted RBP11.14□□□□□ -0.63
TRIM40-206ENST00000376724 ACTR6Q9GZN1 396 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 CDH20Q9HBT6 801 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 KCNK7Q9Y2U2 307 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 RAXQ9Y2V3 346 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 BOLA1Q9Y3E2 137 aa11.14□□□□□ -0.63
TRIM40-206ENST00000376724 ERVH48-1M5A8F1 160 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 PEX14O75381 377 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 IL2RAP01589 272 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 FAM87AP0C7U9 286 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 COX5AP20674 150 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 FAM189A2Q15884 450 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 ZBTB37Q5TC79 503 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 CDH24Q86UP0 819 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 CCDC36Q8IYA8 594 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 OR5L1Q8NGL2 311 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 NUDT16L1Q9BRJ7 211 aaKnown RBP11.13□□□□□ -0.63
TRIM40-206ENST00000376724 EIF3KQ9UBQ5 218 aaKnown RBP11.13□□□□□ -0.63
TRIM40-206ENST00000376724 ATMQ13315 3056 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 CD300LBA8K4G0 201 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 SSX5O60225 188 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 NDUFB6O95139 128 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 CGAP01215 116 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 AMY2AP04746 511 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 ANXA7P20073 488 aaKnown RBP11.13□□□□□ -0.63
TRIM40-206ENST00000376724 GPM6AP51674 278 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 CXADRP78310 365 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 PDZK1IP1Q13113 114 aa11.13□□□□□ -0.63
TRIM40-206ENST00000376724 MRPL49Q13405 166 aaKnown RBP11.13□□□□□ -0.63
TRIM40-206ENST00000376724 ARFRP1Q13795 201 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms