RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 SHISA8B8ZZ34 492 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 EIF1BO60739 113 aaKnown RBP9.76□□□□□ -0.85
CCDC40-203ENST00000374877 ARG1P05089 322 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 RPS2P15880 293 aaKnown RBP9.76□□□□□ -0.85
CCDC40-203ENST00000374877 PAX6P26367 422 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 PTGER4P35408 488 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 EIF1P41567 113 aaKnown RBP9.76□□□□□ -0.85
CCDC40-203ENST00000374877 GLP1RP43220 463 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 DUSP3P51452 185 aaPredicted RBP9.76□□□□□ -0.85
CCDC40-203ENST00000374877 IL15RAQ13261 267 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 LHFPL1Q86WI0 220 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 CD300LFQ8TDQ1 290 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 OCSTAMPQ9BR26 566 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 OR10A2Q9H208 303 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 ELL3Q9HB65 397 aaPredicted RBP9.76□□□□□ -0.85
CCDC40-203ENST00000374877 MMACHCQ9Y4U1 282 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 CPAMD8Q8IZJ3 1885 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 FIGNL2A6NMB9 653 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 IFNA2P01563 188 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 OPN1LWP04000 364 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 AGAP20933 346 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 ACKR3P25106 362 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 BLVRBP30043 206 aaPredicted RBP9.76□□□□□ -0.85
CCDC40-203ENST00000374877 CDAP32320 146 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 RNF212Q495C1 297 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 PLA2G2CQ5R387 149 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 OR2AJ1Q8NGZ0 328 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 TMEM234Q8WY98 164 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 EMG1Q92979 244 aaKnown RBP9.76□□□□□ -0.85
CCDC40-203ENST00000374877 TCEAL7Q9BRU2 100 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 C1orf123Q9NWV4 160 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 ANAPC10Q9UM13 185 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 POMT1Q9Y6A1 747 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 RD3LP0DJH9 198 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 RAB5AP20339 215 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 EFNA3P52797 238 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 ZNF121P58317 390 aaPredicted RBP9.76□□□□□ -0.85
CCDC40-203ENST00000374877 TAS2R46P59540 309 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 HSD11B2P80365 405 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 CFHR1Q03591 330 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 HMGN3Q15651 99 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 GUK1Q16774 197 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 ZNF529Q6P280 563 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 PPP1R3BQ86XI6 285 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 D2HGDHQ8N465 521 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 OR8B12Q8NGG6 310 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 THAP3Q8WTV1 239 aaPredicted RBP9.76□□□□□ -0.85
CCDC40-203ENST00000374877 DAZLQ92904 295 aaKnown RBP9.76□□□□□ -0.85
CCDC40-203ENST00000374877 PRRX2Q99811 253 aa9.76□□□□□ -0.85
CCDC40-203ENST00000374877 FAM212BQ9NTI7 297 aaPredicted RBP9.76□□□□□ -0.85
CCDC40-203ENST00000374877 TRIOO75962 3097 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 MED19A0JLT2 244 aaPredicted RBP9.75□□□□□ -0.85
CCDC40-203ENST00000374877 PRH1P02810 166 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 ANOS1P23352 680 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 FHITP49789 147 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 CARD17Q5XLA6 110 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 OPN5Q6U736 354 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 ERGIC1Q969X5 290 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 OR51M1Q9H341 326 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 CHST11Q9NPF2 352 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 METTL1Q9UBP6 276 aaKnown RBP9.75□□□□□ -0.85
CCDC40-203ENST00000374877 CACNA1EQ15878 2313 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 IFNA21P01568 189 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 SERPINA2P20848 420 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 CAMLGP49069 296 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 FOXL2P58012 376 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 ACY1Q03154 408 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 GUSBP11Q6P575 273 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 DBX2Q6ZNG2 339 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 SHISA6Q6ZSJ9 500 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 ARRDC1-AS1Q9H2J1 176 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 ZNF319Q9P2F9 582 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 MED12Q93074 2177 aa9.75□□□□□ -0.85
CCDC40-203ENST00000374877 IGKV3D-11A0A0A0MRZ8 115 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 A0A1W2PPE2 198 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 PRR33A8MZF0 331 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 UMAD1C9J7I0 102 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 CLN5O75503 358 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 S100PP25815 95 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 LAP3P28838 519 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 C5orf46Q6UWT4 87 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 FAM57BQ71RH2 274 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.74□□□□□ -0.85
CCDC40-203ENST00000374877 SULF2Q8IWU5 870 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 TCTEX1D2Q8WW35 142 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 MRPL24Q96A35 216 aaKnown RBP9.74□□□□□ -0.85
CCDC40-203ENST00000374877 SEBOXQ9HB31 216 aaPredicted RBP9.74□□□□□ -0.85
CCDC40-203ENST00000374877 FBXO7Q9Y3I1 522 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 LHFPL6Q9Y693 200 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 DEDDO75618 318 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 C1QL1O75973 258 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 GAPDHP04406 335 aaKnown RBP9.74□□□□□ -0.85
CCDC40-203ENST00000374877 OR8U8P0C7N1 319 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 SNCAP37840 140 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 ARL4DP49703 201 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 CLRN1P58418 232 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 NCMAPQ5T1S8 102 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 C1orf189Q5VU69 101 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 C1QL2Q7Z5L3 287 aa9.74□□□□□ -0.85
CCDC40-203ENST00000374877 SGPP2Q8IWX5 399 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms