RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 BIVMQ86UB2 503 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 WDFY1Q8IWB7 410 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 RBMXL3Q8N7X1 1067 aaKnown RBP4.17□□□□□ -1.74
USP48-202ENST00000374730 TMEM229BQ8NBD8 167 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 CLEC1AQ8NC01 280 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 NOXO1Q8NFA2 376 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 BEST4Q8NFU0 473 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 OR2M3Q8NG83 312 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 OR10G3Q8NGC4 313 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 OR51D1Q8NGF3 324 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 OR8H1Q8NGG4 311 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 OR4C16Q8NGL9 310 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 OR13C3Q8NGS6 347 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 OR6N1Q8NGY5 312 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 ELP5Q8TE02 316 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 GPX8Q8TED1 209 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 ASB13Q8WXK3 278 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 C11orf40Q8WZ69 217 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 SNAPC3Q92966 411 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 NTNG2Q96CW9 530 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 SPACA9Q96E40 222 aaPredicted RBP4.17□□□□□ -1.74
USP48-202ENST00000374730 DNAJA3Q96EY1 480 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 SLC25A44Q96H78 314 aaPredicted RBP4.17□□□□□ -1.74
USP48-202ENST00000374730 FOXN4Q96NZ1 517 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 RBP7Q96R05 134 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 RASL10BQ96S79 203 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 CMKLR1Q99788 373 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 MRPL13Q9BYD1 178 aaKnown RBP4.17□□□□□ -1.74
USP48-202ENST00000374730 SLCO5A1Q9H2Y9 848 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 METTL7AQ9H8H3 244 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 HEXA-AS1Q9H8Q6 139 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 NOX3Q9HBY0 568 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 MYOZ1Q9NP98 299 aaPredicted RBP4.17□□□□□ -1.74
USP48-202ENST00000374730 FAM206AQ9NX38 181 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 TAS2R4Q9NYW5 299 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 MRPL15Q9P015 296 aaKnown RBP4.17□□□□□ -1.74
USP48-202ENST00000374730 MED11Q9P086 117 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 CYB5R1Q9UHQ9 305 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 PILRBQ9UKJ0 227 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 MGAT4AQ9UM21 535 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 PROCRQ9UNN8 238 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 FLVCR2Q9UPI3 526 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 VDAC3Q9Y277 283 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 HDGFL3Q9Y3E1 203 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 RHBDD3Q9Y3P4 386 aa4.17□□□□□ -1.74
USP48-202ENST00000374730 TRAV18A0A075B6X5 111 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 IGKV1D-43A0A0B4J1Z2 117 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 TMEM269A0A1B0GVZ9 245 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 OR2M5A3KFT3 312 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 LINC00862A6NCI5 91 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 CXorf65A6NEN9 183 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 TUBAL3A6NHL2 446 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 OR6C65A6NJZ3 312 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 CDRT15L2A8MXV6 281 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 A8MZ25 164 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 TEX22C9J3V5 150 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 ZNF878C9JN71 531 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 D6RAR5 112 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 NTN3O00634 580 aaPredicted RBP4.16□□□□□ -1.74
USP48-202ENST00000374730 TP53I11O14683 189 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 OR2J2O76002 312 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 SCGNO76038 276 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 RGS11O94810 467 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 KDM4BO94953 1096 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 OR2A4O95047 310 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 MPZL1O95297 269 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 IGHG1P01857 330 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 TTRP02766 147 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 CD74P04233 296 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 DCNP07585 359 aaKnown RBP4.16□□□□□ -1.74
USP48-202ENST00000374730 H2BFMP0C1H6 154 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 ACSM4P0C7M7 580 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 PGA4P0DJD7 388 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 PGA3P0DJD8 388 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 PTHLHP12272 177 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 NR2C1P13056 603 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 GTF2F2P13984 249 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 PLA2G2AP14555 144 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 ANXA7P20073 488 aaKnown RBP4.16□□□□□ -1.74
USP48-202ENST00000374730 C4BPBP20851 252 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 CCL1P22362 96 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 MPZP25189 248 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 LAP3P28838 519 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 BDKRB2P30411 391 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 ZNF133P52736 654 aaPredicted RBP4.16□□□□□ -1.74
USP48-202ENST00000374730 BIDP55957 195 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 ZMYND11Q15326 602 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 MPPED2Q15777 294 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 EXT1Q16394 746 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 ODF4Q2M2E3 257 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 HLA-BQ31612 363 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 LGALSLQ3ZCW2 172 aaPredicted RBP4.16□□□□□ -1.74
USP48-202ENST00000374730 FAM69BQ5VUD6 431 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 OTPQ5XKR4 325 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 THOC7Q6I9Y2 204 aaKnown RBP4.16□□□□□ -1.74
USP48-202ENST00000374730 OR5M10Q6IEU7 315 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 RAB12Q6IQ22 244 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 SLC25A47Q6Q0C1 308 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 FOXL2NBQ6ZUU3 175 aa4.16□□□□□ -1.74
USP48-202ENST00000374730 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms