RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 TMEM255AQ5JRV8 349 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 ATPAF1Q5TC12 328 aaPredicted RBP7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 STPG1Q5TH74 334 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 FBXW9Q5XUX1 488 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 OVCH2Q7RTZ1 564 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 SLC51BQ86UW2 128 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 SKA3Q8IX90 412 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 Q8IYB0 196 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 FAM185AQ8N0U4 392 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 MUC20Q8N307 709 aaPredicted RBP7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 FAM169BQ8N8A8 192 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 ZNF680Q8NEM1 530 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 BEST4Q8NFU0 473 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 OR6K3Q8NGY3 331 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 OR8S1Q8NH09 359 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 ANGPTL6Q8NI99 470 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 SARAFQ96BY9 339 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 LYZL4Q96KX0 146 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 Q96M66 194 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 SIGLEC12Q96PQ1 595 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 SLX1AQ9BQ83 275 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 SYT3Q9BQG1 590 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 BEX2Q9BXY8 128 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 GSX2Q9BZM3 304 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 WNT5BQ9H1J7 359 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 SMOC1Q9H4F8 434 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 FAM86C1Q9NVL1 165 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 PLEKHJ1Q9NW61 149 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 PIPOXQ9P0Z9 390 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 ZNF319Q9P2F9 582 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 KLK13Q9UKR3 277 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 GPR132Q9UNW8 380 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 KCNK7Q9Y2U2 307 aa7.59□□□□□ -1.19
SNRNP40-202ENST00000373720 TRIOO75962 3097 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 IGHV3-15A0A0B4J1V0 119 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 ZNF891A8MT65 544 aaPredicted RBP7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 AHRRA9YTQ3 701 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 MCRIP1C9JLW8 97 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 G3V3Y1 287 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 AQP7O14520 342 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 SS18L1O75177 396 aaPredicted RBP7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 RP2O75695 350 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 HLA-AP01891 365 aaKnown RBP7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 HOXD4P09016 255 aaPredicted RBP7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 TMEM225BP0DP42 221 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 B4GALT1P15291 398 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 AMY2BP19961 511 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 TCEA1P23193 301 aaKnown RBP7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 HRH1P35367 487 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 APLNRP35414 380 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 OR3A4PP47883 348 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 ZNF81P51508 661 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 UCP3P55916 312 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 TMEM50BP56557 158 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 SRPXP78539 464 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 MZT1Q08AG7 82 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 PDZK1IP1Q13113 114 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 CLN3Q13286 438 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 RBM39Q14498 530 aaKnown RBP7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 CEACAM21Q3KPI0 293 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 LGALSLQ3ZCW2 172 aaPredicted RBP7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 CHRFAM7AQ494W8 412 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 SCGB2B2Q4G0G5 96 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 SLC22A6Q4U2R8 563 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 PABPC1L2AQ5JQF8 200 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 TSPO2Q5TGU0 170 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 ZNF774Q6NX45 483 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 DHRS11Q6UWP2 260 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 BIVMQ86UB2 503 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 LHFPL1Q86WI0 220 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 ZNF573Q86YE8 665 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 OSR2Q8N2R0 312 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 C17orf78Q8N4C9 275 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 OR8H1Q8NGG4 311 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 OR13C8Q8NGS7 320 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 THAP6Q8TBB0 222 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 ROBO4Q8WZ75 1007 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 PIK3IP1Q96FE7 263 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 SLC6A7Q99884 636 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 TINAGL1Q9GZM7 467 aaPredicted RBP7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 DNTTIP1Q9H147 329 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 PPA2Q9H2U2 334 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 LDAHQ9H6V9 325 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 SLC7A10Q9NS82 523 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 NECAP2Q9NVZ3 263 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 FLVCR2Q9UPI3 526 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 C14orf166Q9Y224 244 aaKnown RBP7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 KCNIP3Q9Y2W7 256 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 AUP1Q9Y679 476 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 R4GN57 208 aa7.58□□□□□ -1.2
SNRNP40-202ENST00000373720 KIR2DS1A0A191URI9 304 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 C9orf170A2RU37 121 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 LRP5LA4QPB2 252 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 SLC22A20A6NK97 555 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 DBX1A6NMT0 343 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 NUDT19A8MXV4 375 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 AGRPO00253 132 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 EFSO43281 561 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 LMX1BO60663 402 aa7.57□□□□□ -1.2
SNRNP40-202ENST00000373720 CTSDP07339 412 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms