RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 POMT1Q9Y6A1 747 aa14.38□□□□□ -0.11
SDC4-201ENST00000372733 UNC13CQ8NB66 2214 aa14.37□□□□□ -0.11
SDC4-201ENST00000372733 ZNF205O95201 554 aa14.37□□□□□ -0.11
SDC4-201ENST00000372733 TSPAN15O95858 294 aa14.37□□□□□ -0.11
SDC4-201ENST00000372733 S100A6P06703 90 aa14.37□□□□□ -0.11
SDC4-201ENST00000372733 QDPRP09417 244 aa14.37□□□□□ -0.11
SDC4-201ENST00000372733 SMIM6P0DI80 62 aa14.37□□□□□ -0.11
SDC4-201ENST00000372733 GABRR1P24046 479 aa14.37□□□□□ -0.11
SDC4-201ENST00000372733 CD38P28907 300 aa14.37□□□□□ -0.11
SDC4-201ENST00000372733 SURF2Q15527 256 aaPredicted RBP14.37□□□□□ -0.11
SDC4-201ENST00000372733 FAM189A2Q15884 450 aa14.37□□□□□ -0.11
SDC4-201ENST00000372733 OPN5Q6U736 354 aa14.37□□□□□ -0.11
SDC4-201ENST00000372733 PIGTQ969N2 578 aa14.37□□□□□ -0.11
SDC4-201ENST00000372733 IGHV1OR21-1A0A087WYE8 117 aa14.37□□□□□ -0.11
SDC4-201ENST00000372733 MSTNO14793 375 aa14.37□□□□□ -0.11
SDC4-201ENST00000372733 PRF1P14222 555 aa14.37□□□□□ -0.11
SDC4-201ENST00000372733 FHITP49789 147 aa14.37□□□□□ -0.11
SDC4-201ENST00000372733 LBX1P52954 281 aa14.37□□□□□ -0.11
SDC4-201ENST00000372733 UBE2V2Q15819 145 aa14.37□□□□□ -0.11
SDC4-201ENST00000372733 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.37□□□□□ -0.11
SDC4-201ENST00000372733 SGPP2Q8IWX5 399 aa14.37□□□□□ -0.11
SDC4-201ENST00000372733 RAB33BQ9H082 229 aa14.37□□□□□ -0.11
SDC4-201ENST00000372733 ADAMTS9Q9P2N4 1935 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 hCG_1809904A0A1W2PP81 198 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 A0A1W2PR64 198 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 A0A1W2PRV1 198 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 C7orf77A4D0Y5 90 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 M0R036 132 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 UBE2CO00762 179 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 FCGR2AP12318 317 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 SFTPDP35247 375 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 KRBOX4Q5JUW0 171 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 NSUN5P2Q63ZY6 315 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 D2HGDHQ8N465 521 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 LYPD6BQ8NI32 183 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 STT3BQ8TCJ2 826 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 SPACA1Q9HBV2 294 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 TUBD1Q9UJT1 453 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 TRBV11-1A0A0K0K1C0 115 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 A0A1W2PR77 199 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 SERPINE3A8MV23 424 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 FABP1P07148 127 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 NAT2P11245 290 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 SP6Q3SY56 376 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 PLPP5Q8NEB5 264 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 RGCCQ9H4X1 137 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 STARD10Q9Y365 291 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 MYO7BQ6PIF6 2116 aa14.36□□□□□ -0.11
SDC4-201ENST00000372733 MED19A0JLT2 244 aaPredicted RBP14.35□□□□□ -0.11
SDC4-201ENST00000372733 CRYM-AS1A6NIL9 109 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 LMO7DNF2Z398 122 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 XRCC2O43543 280 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 C1QL1O75973 258 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 SNCAP37840 140 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 FAM3AP98173 230 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 MRGPRX4Q96LA9 322 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 LIME1Q9H400 295 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 SDHAF3Q9NRP4 125 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 FGF21Q9NSA1 209 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 RALGAPA1Q6GYQ0 2036 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 IGHV1OR15-9A0A0B4J2B8 117 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 F5H5K5 113 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 IFNA21P01568 189 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 MT-ND4LP03901 98 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 S100A8P05109 93 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 FABP9Q0Z7S8 132 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 GUK1Q16774 197 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 ANKRD37Q7Z713 158 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 PPP1R3BQ86XI6 285 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 UBAC2Q8NBM4 344 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 NFAM1Q8NET5 270 aaPredicted RBP14.35□□□□□ -0.11
SDC4-201ENST00000372733 OR10G3Q8NGC4 313 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 TOMM40LQ969M1 308 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 SCRT1Q9BWW7 348 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 WFDC1Q9HC57 220 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 FAM212BQ9NTI7 297 aaPredicted RBP14.35□□□□□ -0.11
SDC4-201ENST00000372733 ZNF581Q9P0T4 197 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 PADI1Q9ULC6 663 aa14.35□□□□□ -0.11
SDC4-201ENST00000372733 MASP2O00187 686 aa14.34□□□□□ -0.11
SDC4-201ENST00000372733 DIRAS3O95661 229 aa14.34□□□□□ -0.11
SDC4-201ENST00000372733 MBPP02686 304 aaPredicted RBP14.34□□□□□ -0.11
SDC4-201ENST00000372733 S100A9P06702 114 aaKnown RBP14.34□□□□□ -0.11
SDC4-201ENST00000372733 CTSDP07339 412 aaPredicted RBP14.34□□□□□ -0.11
SDC4-201ENST00000372733 TMEM225BP0DP42 221 aa14.34□□□□□ -0.11
SDC4-201ENST00000372733 ZNF14P17017 642 aaPredicted RBP14.34□□□□□ -0.11
SDC4-201ENST00000372733 AGAP20933 346 aa14.34□□□□□ -0.11
SDC4-201ENST00000372733 ACKR3P25106 362 aa14.34□□□□□ -0.11
SDC4-201ENST00000372733 GRB2P62993 217 aaKnown RBP14.34□□□□□ -0.11
SDC4-201ENST00000372733 OR6X1Q8NH79 312 aa14.34□□□□□ -0.11
SDC4-201ENST00000372733 S100A13Q99584 98 aa14.34□□□□□ -0.11
SDC4-201ENST00000372733 NIT2Q9NQR4 276 aa14.34□□□□□ -0.11
SDC4-201ENST00000372733 GSN-AS1Q9NRJ2 163 aa14.34□□□□□ -0.11
SDC4-201ENST00000372733 A0A1B0GV50 99 aa14.34□□□□□ -0.11
SDC4-201ENST00000372733 ETV2O00321 342 aaPredicted RBP14.34□□□□□ -0.11
SDC4-201ENST00000372733 ZNF43P17038 809 aa14.34□□□□□ -0.11
SDC4-201ENST00000372733 TSPO2Q5TGU0 170 aa14.34□□□□□ -0.11
SDC4-201ENST00000372733 TMEM156Q8N614 296 aa14.34□□□□□ -0.11
SDC4-201ENST00000372733 ZNF501Q96CX3 271 aaPredicted RBP14.34□□□□□ -0.11
SDC4-201ENST00000372733 ZNF251Q9BRH9 671 aa14.34□□□□□ -0.11
SDC4-201ENST00000372733 RSRP1Q9BUV0 290 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms