RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 TRAPPC2P0DI81 140 aa6.26□□□□□ -1.41
TGFBR3-202ENST00000370399 TRAPPC2BP0DI82 140 aa6.26□□□□□ -1.41
TGFBR3-202ENST00000370399 PET100P0DJ07 73 aa6.26□□□□□ -1.41
TGFBR3-202ENST00000370399 CD59P13987 128 aa6.26□□□□□ -1.41
TGFBR3-202ENST00000370399 MRPS34P82930 218 aaKnown RBP6.26□□□□□ -1.41
TGFBR3-202ENST00000370399 PSG4Q00888 419 aa6.26□□□□□ -1.41
TGFBR3-202ENST00000370399 IAH1Q2TAA2 248 aaPredicted RBP6.26□□□□□ -1.41
TGFBR3-202ENST00000370399 SLC25A47Q6Q0C1 308 aa6.26□□□□□ -1.41
TGFBR3-202ENST00000370399 SKA3Q8IX90 412 aa6.26□□□□□ -1.41
TGFBR3-202ENST00000370399 ZDHHC23Q8IYP9 409 aa6.26□□□□□ -1.41
TGFBR3-202ENST00000370399 MUC20Q8N307 709 aaPredicted RBP6.26□□□□□ -1.41
TGFBR3-202ENST00000370399 OR51H1Q8NH63 302 aa6.26□□□□□ -1.41
TGFBR3-202ENST00000370399 WDR89Q96FK6 387 aaPredicted RBP6.26□□□□□ -1.41
TGFBR3-202ENST00000370399 CHST6Q9GZX3 395 aa6.26□□□□□ -1.41
TGFBR3-202ENST00000370399 SHPKQ9UHJ6 478 aa6.26□□□□□ -1.41
TGFBR3-202ENST00000370399 U3KQA8 63 aa6.26□□□□□ -1.41
TGFBR3-202ENST00000370399 A0A0G2JK05 382 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 ANKRD20A5PA0PJZ0 165 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 OR6C65A6NJZ3 312 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 LINC01387J3KSC0 135 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 HIST1H1DP16402 221 aaKnown RBP6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 FCGR2CP31995 323 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 CASP6P55212 293 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 CYCSP99999 105 aaKnown RBP6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 ZNF616Q08AN1 781 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 EIF5AL1Q6IS14 154 aaKnown RBP6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 CCDC36Q8IYA8 594 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 OSR2Q8N2R0 312 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 SEH1LQ96EE3 360 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 UQCC2Q9BRT2 126 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 DEPPQ9NTK1 212 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 SHANK1Q9Y566 2161 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 J3QRE1 110 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 DEGS1O15121 323 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 CDC14BO60729 498 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 EDDM3BP56851 147 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 SNAI3Q3KNW1 292 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 PDZD9Q8IXQ8 264 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 FAM109AQ8N4B1 249 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 CHAC2Q8WUX2 184 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 APOBEC3DQ96AK3 386 aaPredicted RBP6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 B3GAT1Q9P2W7 334 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 PROCRQ9UNN8 238 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 TRANK1O15050 2925 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 PTPRSQ13332 1948 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 A0A1B0GUH1 482 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 TMEM200CA6NKL6 621 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 RRP8O43159 456 aaKnown RBP6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 IGF2P01344 180 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 SERPINF1P36955 418 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 EIF5AP63241 154 aaKnown RBP6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 RNPS1Q15287 305 aaKnown RBP6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 OR8G1Q15617 311 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 ZNF239Q16600 458 aaKnown RBP6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 FAM27BQ5VT28 67 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 UNQ9370/PRO34162Q6UXP9 181 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 NLRC3Q7RTR2 1065 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 ZBTB44Q8NCP5 570 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 SLC30A7Q8NEW0 376 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 FDCSPQ8NFU4 85 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 OR6S1Q8NH40 331 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 TERB2Q8NHR7 220 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 DYRK2Q92630 601 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 ZNF649Q9BS31 505 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 OR2H1Q9GZK4 316 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 FAM234AQ9H0X4 552 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 SPEF1Q9Y4P9 236 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 WNK2Q9Y3S1 2297 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 MED13Q9UHV7 2174 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 IGF2RP11717 2491 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 M0R1B8 84 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 RGS11O94810 467 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 GSK3AP49840 483 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 FUT6P51993 359 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 ARHGDIBP52566 201 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 ZNF133P52736 654 aaPredicted RBP6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 KLF9Q13886 244 aaPredicted RBP6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 KIAA2026Q5HYC2 2103 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 LHFPL2Q6ZUX7 228 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 COMMD7Q86VX2 200 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 CCDC71LQ8N9Z2 235 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 LILRB4Q8NHJ6 448 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 CLCC1Q96S66 551 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 G6PC2Q9NQR9 355 aa6.25□□□□□ -1.41
TGFBR3-202ENST00000370399 VCANP13611 3396 aa6.24□□□□□ -1.41
TGFBR3-202ENST00000370399 OR5H14A6NHG9 310 aa6.24□□□□□ -1.41
TGFBR3-202ENST00000370399 FIGNL2A6NMB9 653 aa6.24□□□□□ -1.41
TGFBR3-202ENST00000370399 PRRG2O14669 202 aa6.24□□□□□ -1.41
TGFBR3-202ENST00000370399 HSD17B6O14756 317 aa6.24□□□□□ -1.41
TGFBR3-202ENST00000370399 NUPL2O15504 423 aaKnown RBP6.24□□□□□ -1.41
TGFBR3-202ENST00000370399 WDR1O75083 606 aa6.24□□□□□ -1.41
TGFBR3-202ENST00000370399 AGFG2O95081 481 aa6.24□□□□□ -1.41
TGFBR3-202ENST00000370399 GSTP1P09211 210 aaKnown RBP6.24□□□□□ -1.41
TGFBR3-202ENST00000370399 IRF2P14316 349 aa6.24□□□□□ -1.41
TGFBR3-202ENST00000370399 GLRA1P23415 457 aa6.24□□□□□ -1.41
TGFBR3-202ENST00000370399 S100A11P31949 105 aa6.24□□□□□ -1.41
TGFBR3-202ENST00000370399 LUMP51884 338 aaPredicted RBP6.24□□□□□ -1.41
TGFBR3-202ENST00000370399 PRDX4Q13162 271 aa6.24□□□□□ -1.41
TGFBR3-202ENST00000370399 DHRS2Q13268 280 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms