RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 RBP2P50120 134 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 ATP1B3P54709 279 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 PPP3R1P63098 170 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 ACSM3Q53FZ2 586 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 UNQ9370/PRO34162Q6UXP9 181 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 SPNS3Q6ZMD2 512 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 LHFPL2Q6ZUX7 228 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 C11orf53Q8IXP5 236 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 OR10Z1Q8NGY1 313 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 SF3B6Q9Y3B4 125 aaKnown RBP13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 IGHV4-30-2A0A087WSY4 118 aa13.09□□□□□ -0.31
PRPF38B-202ENST00000370022 hCG_1807616A0A1W2PRN6 198 aa13.09□□□□□ -0.31
PRPF38B-202ENST00000370022 MAGEB3O15480 346 aa13.09□□□□□ -0.31
PRPF38B-202ENST00000370022 PPIHO43447 177 aaKnown RBP13.09□□□□□ -0.31
PRPF38B-202ENST00000370022 INMTO95050 263 aa13.09□□□□□ -0.31
PRPF38B-202ENST00000370022 GALP22466 123 aa13.09□□□□□ -0.31
PRPF38B-202ENST00000370022 NR4A2P43354 598 aa13.09□□□□□ -0.31
PRPF38B-202ENST00000370022 HAAOP46952 286 aa13.09□□□□□ -0.31
PRPF38B-202ENST00000370022 NEDD8Q15843 81 aa13.09□□□□□ -0.31
PRPF38B-202ENST00000370022 SSX1Q16384 188 aa13.09□□□□□ -0.31
PRPF38B-202ENST00000370022 WDR82Q6UXN9 313 aa13.09□□□□□ -0.31
PRPF38B-202ENST00000370022 TGIF2LYQ8IUE0 185 aa13.09□□□□□ -0.31
PRPF38B-202ENST00000370022 SCCPDHQ8NBX0 429 aa13.09□□□□□ -0.31
PRPF38B-202ENST00000370022 TRMT10AQ8TBZ6 339 aaKnown RBP13.09□□□□□ -0.31
PRPF38B-202ENST00000370022 RPL3LQ92901 407 aaKnown RBP13.09□□□□□ -0.31
PRPF38B-202ENST00000370022 BPESC1Q9GZL8 116 aa13.09□□□□□ -0.31
PRPF38B-202ENST00000370022 TAS2R4Q9NYW5 299 aa13.09□□□□□ -0.31
PRPF38B-202ENST00000370022 FOXJ3Q9UPW0 622 aa13.09□□□□□ -0.31
PRPF38B-202ENST00000370022 POLDIP2Q9Y2S7 368 aa13.09□□□□□ -0.31
PRPF38B-202ENST00000370022 NPTNQ9Y639 398 aa13.09□□□□□ -0.31
PRPF38B-202ENST00000370022 TRIM64BA6NI03 449 aa13.08□□□□□ -0.32
PRPF38B-202ENST00000370022 RGS9O75916 674 aaPredicted RBP13.08□□□□□ -0.32
PRPF38B-202ENST00000370022 IGFBP3P17936 291 aaPredicted RBP13.08□□□□□ -0.32
PRPF38B-202ENST00000370022 MPZP25189 248 aa13.08□□□□□ -0.32
PRPF38B-202ENST00000370022 TGFBR2P37173 567 aa13.08□□□□□ -0.32
PRPF38B-202ENST00000370022 MTCP1P56278 107 aa13.08□□□□□ -0.32
PRPF38B-202ENST00000370022 RPS25P62851 125 aaKnown RBP13.08□□□□□ -0.32
PRPF38B-202ENST00000370022 DMRTC1Q5HYR2 192 aa13.08□□□□□ -0.32
PRPF38B-202ENST00000370022 ASPHD2Q6ICH7 369 aa13.08□□□□□ -0.32
PRPF38B-202ENST00000370022 HAGHLQ6PII5 290 aaPredicted RBP13.08□□□□□ -0.32
PRPF38B-202ENST00000370022 ZNF671Q8TAW3 534 aa13.08□□□□□ -0.32
PRPF38B-202ENST00000370022 NPRL2Q8WTW4 380 aa13.08□□□□□ -0.32
PRPF38B-202ENST00000370022 AQP3Q92482 292 aa13.08□□□□□ -0.32
PRPF38B-202ENST00000370022 TMEM203Q969S6 136 aa13.08□□□□□ -0.32
PRPF38B-202ENST00000370022 MUL1Q969V5 352 aa13.08□□□□□ -0.32
PRPF38B-202ENST00000370022 PKIBQ9C010 78 aa13.08□□□□□ -0.32
PRPF38B-202ENST00000370022 TMEM138Q9NPI0 162 aa13.08□□□□□ -0.32
PRPF38B-202ENST00000370022 TANC2Q9HCD6 1990 aa13.08□□□□□ -0.32
PRPF38B-202ENST00000370022 PRRC2AP48634 2157 aaKnown RBP13.08□□□□□ -0.32
PRPF38B-202ENST00000370022 MAGEA13PA6NCF6 341 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 J3QT63 122 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 CYB5R3P00387 301 aaPredicted RBP13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 LHBP01229 141 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 ALDOBP05062 364 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 HCKP08631 526 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 JUNBP17275 347 aaPredicted RBP13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 BTG1P62324 171 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 IL24Q13007 206 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 ZNF826PQ6ZT77 177 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 CEACAM19Q7Z692 300 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 NOX4Q9NPH5 578 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 WIPI2Q9Y4P8 454 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 CHD3Q12873 2000 aaKnown RBP13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 IGKV1-27A0A075B6S5 117 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 PPIAL4EA0A075B759 164 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 PPIAL4DF5H284 164 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 ARL6IP5O75915 188 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 ACAA1P09110 424 aaPredicted RBP13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 PPIAL4FP0DN26 164 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 BDKRB2P30411 391 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 CD200R1LQ6Q8B3 271 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 MUC20Q8N307 709 aaPredicted RBP13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 GCSAMQ8N6F7 178 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 DRAXINQ8NBI3 349 aaPredicted RBP13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 LRRC29Q8WV35 223 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 REG4Q9BYZ8 158 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 TCF7L1Q9HCS4 588 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 DCAF16Q9NXF7 216 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 PPIAL4AQ9Y536 164 aa13.07□□□□□ -0.32
PRPF38B-202ENST00000370022 CCDC168Q8NDH2 2452 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 TRDV1A0A1B0GX56 115 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 A0A1W2PPK0 400 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 SRRM5B3KS81 715 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 GABRPO00591 440 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 PIN1P1O15428 100 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 CYB5AP00167 134 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 IGHV2-70P01814 119 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 UCHL1P09936 223 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 USF1P22415 310 aaPredicted RBP13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 MDH2P40926 338 aaKnown RBP13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 GP2P55259 537 aaKnown RBP13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 FABP5Q01469 135 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 INSL4Q14641 139 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 KISS1Q15726 138 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 KCNJ8Q15842 424 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 TMEM155Q4W5P6 130 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 HSD17B12Q53GQ0 312 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 TMEM91Q6ZNR0 172 aa13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 LRRC28Q86X40 367 aaPredicted RBP13.06□□□□□ -0.32
PRPF38B-202ENST00000370022 CALHM1Q8IU99 346 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms