RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 EFNB3Q15768 340 aa9.31□□□□□ -0.92
BRCC3-204ENST00000369462 RAB11BQ15907 218 aa9.31□□□□□ -0.92
BRCC3-204ENST00000369462 ZNF404Q494X3 552 aa9.31□□□□□ -0.92
BRCC3-204ENST00000369462 CALHM1Q8IU99 346 aa9.31□□□□□ -0.92
BRCC3-204ENST00000369462 CDH26Q8IXH8 852 aa9.31□□□□□ -0.92
BRCC3-204ENST00000369462 PNLDC1Q8NA58 520 aaKnown RBP9.31□□□□□ -0.92
BRCC3-204ENST00000369462 OR6M1Q8NGM8 313 aa9.31□□□□□ -0.92
BRCC3-204ENST00000369462 MCFD2Q8NI22 146 aa9.31□□□□□ -0.92
BRCC3-204ENST00000369462 ZNF671Q8TAW3 534 aa9.31□□□□□ -0.92
BRCC3-204ENST00000369462 LIN7BQ9HAP6 207 aa9.31□□□□□ -0.92
BRCC3-204ENST00000369462 STEAP1Q9UHE8 339 aa9.31□□□□□ -0.92
BRCC3-204ENST00000369462 NOP16Q9Y3C1 178 aaKnown RBP9.31□□□□□ -0.92
BRCC3-204ENST00000369462 ARFGEF3Q5TH69 2177 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 FAM221AA4D161 298 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 CTAG2O75638 210 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 GRPP07492 148 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 PTGFRP43088 359 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 C1orf100Q5SVJ3 147 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 FAM166AQ6J272 317 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 WDR86Q86TI4 376 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 SPERTQ8NA61 448 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 OR51D1Q8NGF3 324 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 TNFAIP8L1Q8WVP5 186 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 AP3S1Q92572 193 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 CPNE2Q96FN4 548 aaPredicted RBP9.3□□□□□ -0.92
BRCC3-204ENST00000369462 C6orf62Q9GZU0 229 aaPredicted RBP9.3□□□□□ -0.92
BRCC3-204ENST00000369462 CXXC4Q9H2H0 198 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 UBTD1Q9HAC8 227 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 DYNLRB1Q9NP97 96 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 FAIMQ9NVQ4 179 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 COMMD3Q9UBI1 195 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 SPRY1O43609 319 aaPredicted RBP9.3□□□□□ -0.92
BRCC3-204ENST00000369462 ANGPTL7O43827 346 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 IGHV1-46P01743 117 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 TMEM225BP0DP42 221 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 SNRPBP14678 240 aaKnown RBP9.3□□□□□ -0.92
BRCC3-204ENST00000369462 ZNF154Q13106 437 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 FAM76BQ5HYJ3 339 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 AWAT2Q6E213 333 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 HAGHLQ6PII5 290 aaPredicted RBP9.3□□□□□ -0.92
BRCC3-204ENST00000369462 C1QL2Q7Z5L3 287 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 CLEC4MQ9H2X3 399 aaPredicted RBP9.3□□□□□ -0.92
BRCC3-204ENST00000369462 ZDHHC8Q9ULC8 765 aa9.3□□□□□ -0.92
BRCC3-204ENST00000369462 MRPS28Q9Y2Q9 187 aaKnown RBP9.3□□□□□ -0.92
BRCC3-204ENST00000369462 C17orf100A8MU93 164 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 RGS5O15539 181 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 GOSR1O95249 250 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 SOD3P08294 240 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 ARSBP15848 533 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 BMXP51813 675 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 SNRPD2P62316 118 aaKnown RBP9.29□□□□□ -0.92
BRCC3-204ENST00000369462 CCL8P80075 99 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 PDZK1IP1Q13113 114 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 GLIPR1L1Q6UWM5 242 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 SLC25A26Q70HW3 274 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 ZNF573Q86YE8 665 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 ZNF611Q8N823 705 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 SLC25A28Q96A46 364 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 FAM3DQ96BQ1 224 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 PSMG3-AS1Q96PY0 264 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 OR2V2Q96R30 315 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 OR51I2Q9H344 312 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 MS4A5Q9H3V2 200 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 KCNK15Q9H427 330 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 ELL3Q9HB65 397 aaPredicted RBP9.29□□□□□ -0.92
BRCC3-204ENST00000369462 UFSP2Q9NUQ7 469 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 C14orf119Q9NWQ9 140 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 PTPN13Q12923 2485 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 CTDSP2O14595 271 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 DANCRP0C864 163 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 ZP1P60852 638 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 RIN1Q13671 783 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 MPPED2Q15777 294 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 C2orf76Q3KRA6 126 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 PRAMEF6Q5VXH4 476 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 KCTD12Q96CX2 325 aaKnown RBP9.29□□□□□ -0.92
BRCC3-204ENST00000369462 S100A13Q99584 98 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 ING4Q9UNL4 249 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 LAMP3Q9UQV4 416 aa9.29□□□□□ -0.92
BRCC3-204ENST00000369462 USF3Q68DE3 2245 aa9.28□□□□□ -0.92
BRCC3-204ENST00000369462 CDIPTO14735 213 aa9.28□□□□□ -0.92
BRCC3-204ENST00000369462 CLPXO76031 633 aa9.28□□□□□ -0.92
BRCC3-204ENST00000369462 CD8AP01732 235 aa9.28□□□□□ -0.92
BRCC3-204ENST00000369462 TNFSF4P23510 183 aa9.28□□□□□ -0.92
BRCC3-204ENST00000369462 CFPP27918 469 aa9.28□□□□□ -0.92
BRCC3-204ENST00000369462 TNFAIP6P98066 277 aaPredicted RBP9.28□□□□□ -0.92
BRCC3-204ENST00000369462 SLC22A6Q4U2R8 563 aa9.28□□□□□ -0.92
BRCC3-204ENST00000369462 SPRNQ5BIV9 151 aa9.28□□□□□ -0.92
BRCC3-204ENST00000369462 AGAP6Q5VW22 663 aa9.28□□□□□ -0.92
BRCC3-204ENST00000369462 OR10K2Q6IF99 312 aa9.28□□□□□ -0.92
BRCC3-204ENST00000369462 SCCPDHQ8NBX0 429 aa9.28□□□□□ -0.92
BRCC3-204ENST00000369462 OR5H6Q8NGV6 325 aa9.28□□□□□ -0.92
BRCC3-204ENST00000369462 OR51F2Q8NH61 342 aa9.28□□□□□ -0.92
BRCC3-204ENST00000369462 LGALS14Q8TCE9 139 aa9.28□□□□□ -0.92
BRCC3-204ENST00000369462 NXF2Q9GZY0 626 aaKnown RBP9.28□□□□□ -0.92
BRCC3-204ENST00000369462 MMP27Q9H306 513 aa9.28□□□□□ -0.92
BRCC3-204ENST00000369462 CBLN4Q9NTU7 201 aa9.28□□□□□ -0.92
BRCC3-204ENST00000369462 ABRACLQ9P1F3 81 aa9.28□□□□□ -0.92
BRCC3-204ENST00000369462 OR5V1Q9UGF6 321 aa9.28□□□□□ -0.92
BRCC3-204ENST00000369462 LRP5LA4QPB2 252 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms