RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 SSX3Q99909 188 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 FBLN5Q9UBX5 448 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 FOXJ3Q9UPW0 622 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 KLHDC2Q9Y2U9 406 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 MGAM2Q2M2H8 2515 aa8.44□□□□□ -1.06
CLRN3-201ENST00000368671 IGKV1D-17A0A075B6S4 117 aa8.43□□□□□ -1.06
CLRN3-201ENST00000368671 ZNF732B4DXR9 585 aa8.43□□□□□ -1.06
CLRN3-201ENST00000368671 G3V4G9 280 aa8.43□□□□□ -1.06
CLRN3-201ENST00000368671 PSG2P11465 335 aa8.43□□□□□ -1.06
CLRN3-201ENST00000368671 PAX6P26367 422 aa8.43□□□□□ -1.06
CLRN3-201ENST00000368671 DCTDP32321 178 aa8.43□□□□□ -1.06
CLRN3-201ENST00000368671 CAPZA1P52907 286 aa8.43□□□□□ -1.06
CLRN3-201ENST00000368671 FAM98BQ52LJ0 330 aaKnown RBP8.43□□□□□ -1.06
CLRN3-201ENST00000368671 DMRTC1Q5HYR2 192 aa8.43□□□□□ -1.06
CLRN3-201ENST00000368671 HCP5Q6MZN7 132 aa8.43□□□□□ -1.06
CLRN3-201ENST00000368671 MOB3CQ70IA8 216 aa8.43□□□□□ -1.06
CLRN3-201ENST00000368671 KRT77Q7Z794 578 aa8.43□□□□□ -1.06
CLRN3-201ENST00000368671 COMMD2Q86X83 199 aa8.43□□□□□ -1.06
CLRN3-201ENST00000368671 DHFR2Q86XF0 187 aa8.43□□□□□ -1.06
CLRN3-201ENST00000368671 OR4C13Q8NGP0 309 aa8.43□□□□□ -1.06
CLRN3-201ENST00000368671 PPP1R35Q8TAP8 253 aa8.43□□□□□ -1.06
CLRN3-201ENST00000368671 GIPC3Q8TF64 312 aa8.43□□□□□ -1.06
CLRN3-201ENST00000368671 NIPAL2Q9H841 368 aa8.43□□□□□ -1.06
CLRN3-201ENST00000368671 ARL2BPQ9Y2Y0 163 aa8.43□□□□□ -1.06
CLRN3-201ENST00000368671 SF3B6Q9Y3B4 125 aaKnown RBP8.43□□□□□ -1.06
CLRN3-201ENST00000368671 LRP12Q9Y561 859 aa8.43□□□□□ -1.06
CLRN3-201ENST00000368671 MAB21L2Q9Y586 359 aa8.43□□□□□ -1.06
CLRN3-201ENST00000368671 PSMD9O00233 223 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 DCTN3O75935 186 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 CST1P01037 141 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 EFNB2P52799 333 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 RPS7P62081 194 aaKnown RBP8.42□□□□□ -1.06
CLRN3-201ENST00000368671 GNG3P63215 75 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 GINS1Q14691 196 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 LRRC75BQ2VPJ9 315 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 BEAN1Q3B7T3 259 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 FAM76BQ5HYJ3 339 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 LCN8Q6JVE9 175 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 CD300LDQ6UXZ3 194 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 MKXQ8IYA7 352 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 KLHDC1Q8N7A1 406 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 OR5D13Q8NGL4 314 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 OR2T6Q8NHC8 308 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 ZNF671Q8TAW3 534 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 CLPTM1LQ96KA5 538 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 FEVQ99581 238 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 NKX3-1Q99801 234 aaPredicted RBP8.42□□□□□ -1.06
CLRN3-201ENST00000368671 FAM234AQ9H0X4 552 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 OR51I2Q9H344 312 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 MUC13Q9H3R2 512 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 YY1AP1Q9H869 796 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 LIN7BQ9HAP6 207 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 C19orf12Q9NSK7 152 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 LAMP5Q9UJQ1 280 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 ZNF222Q9UK12 451 aa8.42□□□□□ -1.06
CLRN3-201ENST00000368671 TRBV23-1A0A0A0MS06 115 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 B2RBV5 119 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 GNGT2O14610 69 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 PRODHO43272 600 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 ALX3O95076 343 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 PRB2P02812 416 aaPredicted RBP8.41□□□□□ -1.06
CLRN3-201ENST00000368671 VSIG10L2P0DP72 767 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 COX7A1P24310 79 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 KIR2DS4P43632 304 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 CEBPDP49716 269 aaPredicted RBP8.41□□□□□ -1.06
CLRN3-201ENST00000368671 BMXP51813 675 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 HCCSP53701 268 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 GNGT1P63211 74 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 MS4A2Q01362 244 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 CEACAM21Q3KPI0 293 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 PLCXD3Q63HM9 321 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 HAGHLQ6PII5 290 aaPredicted RBP8.41□□□□□ -1.06
CLRN3-201ENST00000368671 THAP5Q7Z6K1 395 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 CPOQ8IVL8 374 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 LYG1Q8N1E2 194 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 BBS1Q8NFJ9 593 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 LRGUKQ96M69 825 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 ZNF488Q96MN9 340 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 TTTY10Q9BZA0 68 aa8.41□□□□□ -1.06
CLRN3-201ENST00000368671 TMEM269A0A1B0GVZ9 245 aa8.4□□□□□ -1.06
CLRN3-201ENST00000368671 A0A1W2PPH5 198 aa8.4□□□□□ -1.06
CLRN3-201ENST00000368671 RFPL4AA6NLU0 287 aa8.4□□□□□ -1.06
CLRN3-201ENST00000368671 RFPL4AL1F8VTS6 287 aa8.4□□□□□ -1.06
CLRN3-201ENST00000368671 GSC2O15499 205 aa8.4□□□□□ -1.06
CLRN3-201ENST00000368671 CHST1O43916 411 aa8.4□□□□□ -1.06
CLRN3-201ENST00000368671 OPN1MWP04001 364 aa8.4□□□□□ -1.06
CLRN3-201ENST00000368671 MRPL3P09001 348 aaKnown RBP8.4□□□□□ -1.06
CLRN3-201ENST00000368671 OPN1MW2P0DN77 364 aa8.4□□□□□ -1.06
CLRN3-201ENST00000368671 OPN1MW3P0DN78 364 aa8.4□□□□□ -1.06
CLRN3-201ENST00000368671 RAP2AP10114 183 aa8.4□□□□□ -1.06
CLRN3-201ENST00000368671 CCL3L1P16619 93 aa8.4□□□□□ -1.06
CLRN3-201ENST00000368671 FAHP16930 419 aa8.4□□□□□ -1.06
CLRN3-201ENST00000368671 ALOX5APP20292 161 aa8.4□□□□□ -1.06
CLRN3-201ENST00000368671 MNAT1P51948 309 aa8.4□□□□□ -1.06
CLRN3-201ENST00000368671 GYS2P54840 703 aa8.4□□□□□ -1.06
CLRN3-201ENST00000368671 ERVFRD-1P60508 538 aa8.4□□□□□ -1.06
CLRN3-201ENST00000368671 TRIM25Q14258 630 aaKnown RBP8.4□□□□□ -1.06
CLRN3-201ENST00000368671 FAM189A2Q15884 450 aa8.4□□□□□ -1.06
CLRN3-201ENST00000368671 PLA1AQ53H76 456 aa8.4□□□□□ -1.06
CLRN3-201ENST00000368671 SLC35D3Q5M8T2 416 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms