RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 TIMM9Q9Y5J7 89 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 MED19A0JLT2 244 aaPredicted RBP11.48□□□□□ -0.57
PTPRK-207ENST00000368226 PYCARD-AS1I3L0S3 204 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 FUT7Q11130 342 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 MPPED2Q15777 294 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 Q3ZCU0 254 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 ACOT7LQ6ZUV0 252 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 C19orf43Q9BQ61 176 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 CXorf51AA0A1B0GTR3 108 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 MOSPD3O75425 235 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 HOXC4P09017 264 aaPredicted RBP11.48□□□□□ -0.57
PTPRK-207ENST00000368226 SLC25A4P12235 298 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 RPS4XP62701 263 aaKnown RBP11.48□□□□□ -0.57
PTPRK-207ENST00000368226 ZIC1Q15915 447 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 ZNF787Q6DD87 383 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 TMEM108Q6UXF1 575 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 ARHGEF39Q8N4T4 335 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 LHX4Q969G2 390 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 ERRFI1Q9UJM3 462 aaPredicted RBP11.48□□□□□ -0.57
PTPRK-207ENST00000368226 COL4A5P29400 1685 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 A0A1B0GTQ1 180 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 ZFPL1O95159 310 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 PTBP1P26599 531 aaKnown RBP eCLIP11.48□□□□□ -0.574e-7■■■■□ 21.6
PTPRK-207ENST00000368226 SELENOPP49908 381 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 KLF3P57682 345 aaPredicted RBP11.48□□□□□ -0.57
PTPRK-207ENST00000368226 H3F3CQ6NXT2 135 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 LYPD8Q6UX82 237 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 SLC36A1Q7Z2H8 476 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 ZAR1Q86SH2 424 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 OR5B3Q8NH48 314 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 ABHD3Q8WU67 409 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 RPEQ96AT9 228 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 C4orf45Q96LM5 186 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 ZNF331Q9NQX6 463 aaPredicted RBP11.48□□□□□ -0.57
PTPRK-207ENST00000368226 FOXJ3Q9UPW0 622 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 C5orf67F2Z3F1 127 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 GPR31O00270 319 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 FUT3P21217 361 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 SRD5A2P31213 254 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 SNTB1Q13884 538 aaKnown RBP11.47□□□□□ -0.57
PTPRK-207ENST00000368226 BHLHA15Q7RTS1 189 aaPredicted RBP11.47□□□□□ -0.57
PTPRK-207ENST00000368226 KDF1Q8NAX2 398 aaPredicted RBP11.47□□□□□ -0.57
PTPRK-207ENST00000368226 OR2Y1Q8NGV0 311 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 FBXO8Q9NRD0 319 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 UMAD1C9J7I0 102 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 SLC38A6Q8IZM9 456 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 TERB2Q8NHR7 220 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 PPP1R1CQ8WVI7 109 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 EDARADDQ8WWZ3 215 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 ADGRG7Q96K78 797 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 LPAR2Q9HBW0 351 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 MYOZ1Q9NP98 299 aaPredicted RBP11.47□□□□□ -0.57
PTPRK-207ENST00000368226 A0A1W2PQF6 199 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 OR2M5A3KFT3 312 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 EPOPA6NHQ4 379 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 TSTD3H0UI37 97 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 SLC17A2O00624 439 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 DHRS3O75911 302 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 HPP00738 406 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 HMGN3Q15651 99 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 FAM58AQ8N1B3 248 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 C17orf47Q8NEP4 570 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 PRDM6Q9NQX0 595 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 ZNF785A8K8V0 405 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 HSPB2A8KAH6 182 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 RTP5Q14D33 572 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 HSPB2Q16082 182 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 ACOT6Q3I5F7 207 aaPredicted RBP11.47□□□□□ -0.57
PTPRK-207ENST00000368226 ADAM5Q6NVV9 412 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 ZNF705AQ6ZN79 300 aaPredicted RBP11.47□□□□□ -0.57
PTPRK-207ENST00000368226 Q6ZNX1 250 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 WDR89Q96FK6 387 aaPredicted RBP11.47□□□□□ -0.57
PTPRK-207ENST00000368226 UCN2Q96RP3 112 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 ACTR3CQ9C0K3 210 aaPredicted RBP11.47□□□□□ -0.57
PTPRK-207ENST00000368226 ZNF385DQ9H6B1 395 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 CHEK1O14757 476 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 ZNF90Q03938 601 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 PP6455Q8WZ26 134 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 GPR87Q9BY21 358 aa11.47□□□□□ -0.57
PTPRK-207ENST00000368226 E5RGE8 158 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 LINC01387J3KSC0 135 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 BPIFB3P59826 476 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 TIAL1Q01085 375 aaKnown RBP eCLIP11.46□□□□□ -0.575e-7■■■■■ 27.8
PTPRK-207ENST00000368226 TPBGQ13641 420 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 HIKESHIQ53FT3 197 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 OR10AC1Q8NH08 325 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 PLSCR3Q9NRY6 295 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 NSG2Q9Y328 171 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 F5P12259 2224 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 MASP2O00187 686 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 CELA2AP08217 269 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 CALCRP30988 508 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 HOXC8P31273 242 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 C2orf50Q96LR7 162 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 ICAM5Q9UMF0 924 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 USP54Q70EL1 1684 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 LALBAP00709 142 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 NTF3P20783 257 aa11.46□□□□□ -0.57
PTPRK-207ENST00000368226 PEBP1P30086 187 aaKnown RBP11.46□□□□□ -0.57
PTPRK-207ENST00000368226 PTGFRP43088 359 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms