RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 GABRA6Q16445 453 aa10.47□□□□□ -0.73
USF1-203ENST00000368021 SNAI3Q3KNW1 292 aa10.47□□□□□ -0.73
USF1-203ENST00000368021 LBHQ53QV2 105 aaPredicted RBP10.47□□□□□ -0.73
USF1-203ENST00000368021 C17orf78Q8N4C9 275 aa10.47□□□□□ -0.73
USF1-203ENST00000368021 RPRMLQ8N4K4 120 aa10.47□□□□□ -0.73
USF1-203ENST00000368021 NKAIN3Q8N8D7 197 aa10.47□□□□□ -0.73
USF1-203ENST00000368021 NAXEQ8NCW5 288 aa10.47□□□□□ -0.73
USF1-203ENST00000368021 OR14K1Q8NGZ2 314 aa10.47□□□□□ -0.73
USF1-203ENST00000368021 FGGYQ96C11 551 aa10.47□□□□□ -0.73
USF1-203ENST00000368021 ADAT3Q96EY9 351 aaPredicted RBP10.47□□□□□ -0.73
USF1-203ENST00000368021 LYZL4Q96KX0 146 aa10.47□□□□□ -0.73
USF1-203ENST00000368021 CMTM3Q96MX0 182 aa10.47□□□□□ -0.73
USF1-203ENST00000368021 MED28Q9H204 178 aa10.47□□□□□ -0.73
USF1-203ENST00000368021 OR51M1Q9H341 326 aa10.47□□□□□ -0.73
USF1-203ENST00000368021 NOX3Q9HBY0 568 aa10.47□□□□□ -0.73
USF1-203ENST00000368021 TAS2R4Q9NYW5 299 aa10.47□□□□□ -0.73
USF1-203ENST00000368021 CBY1Q9Y3M2 126 aa10.47□□□□□ -0.73
USF1-203ENST00000368021 V9GYS6 101 aa10.47□□□□□ -0.73
USF1-203ENST00000368021 SPTAN1Q13813 2472 aaKnown RBP10.46□□□□□ -0.73
USF1-203ENST00000368021 CRYBG3Q68DQ2 2970 aa10.46□□□□□ -0.73
USF1-203ENST00000368021 LOC100509620A0A075B734 347 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 CIB4A0PJX0 185 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 C5orf63A6NC05 138 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 CCL21O00585 134 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 LMX1BO60663 402 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 RAD51DO75771 328 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 LYZL6O75951 148 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 HTR3BO95264 441 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 LCATP04180 440 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 GLI4P10075 376 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 SLC2A2P11168 524 aaPredicted RBP10.46□□□□□ -0.74
USF1-203ENST00000368021 ZNF20P17024 532 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 EXOSC2Q13868 293 aaKnown RBP10.46□□□□□ -0.74
USF1-203ENST00000368021 SWI5Q1ZZU3 235 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 GLT8D1Q68CQ7 371 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 LRRC28Q86X40 367 aaPredicted RBP10.46□□□□□ -0.74
USF1-203ENST00000368021 ZNF584Q8IVC4 421 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 TRMT10AQ8TBZ6 339 aaKnown RBP10.46□□□□□ -0.74
USF1-203ENST00000368021 DIRAS2Q96HU8 199 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 FAM71F1Q96KD3 344 aaPredicted RBP10.46□□□□□ -0.74
USF1-203ENST00000368021 POM121L2Q96KW2 1035 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 ZNF75AQ96N20 296 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 SEC22CQ9BRL7 303 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 PLEKHA1Q9HB21 404 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 C14orf119Q9NWQ9 140 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 DOPEY2Q9Y3R5 2298 aa10.46□□□□□ -0.74
USF1-203ENST00000368021 XRCC2O43543 280 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 HPGDSO60760 199 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 SERPINA5P05154 406 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 RNF224P0DH78 156 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 CALCBP10092 127 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 GNALP38405 381 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 INPP1P49441 399 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 EVX1P49640 407 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 CASP6P55212 293 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 UBE2NP61088 152 aaKnown RBP10.45□□□□□ -0.74
USF1-203ENST00000368021 GFOD2Q3B7J2 385 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 FAM131AQ6UXB0 335 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 MDP1Q86V88 176 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 SAMD12Q8N8I0 201 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 ZNF610Q8N9Z0 462 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 UXS1Q8NBZ7 420 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 ZNF671Q8TAW3 534 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 SPSB4Q96A44 273 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 FOXRED1Q96CU9 486 aaPredicted RBP10.45□□□□□ -0.74
USF1-203ENST00000368021 REEP6Q96HR9 211 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 SOX7Q9BT81 388 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 C11orf54Q9H0W9 315 aaPredicted RBP10.45□□□□□ -0.74
USF1-203ENST00000368021 OBP2BQ9NPH6 170 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 TMEM138Q9NPI0 162 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 UFSP2Q9NUQ7 469 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 STEAP1Q9UHE8 339 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 MGAT4AQ9UM21 535 aa10.45□□□□□ -0.74
USF1-203ENST00000368021 C5orf49A4QMS7 147 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 FABP12A6NFH5 140 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 SULT1C2O00338 296 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 SLC17A2O00624 439 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 AKR7A2O43488 359 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 ERCC1P07992 297 aaPredicted RBP10.44□□□□□ -0.74
USF1-203ENST00000368021 BDKRB2P30411 391 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 CALCRP30988 508 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 HOXC12P31275 282 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 OPRM1P35372 400 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 APLNRP35414 380 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 THBS4P35443 961 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 RNF212Q495C1 297 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 ANKRD39Q53RE8 183 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 FAM166AQ6J272 317 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 PYHIN1Q6K0P9 492 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 UTS2BQ765I0 119 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 DNAAF1Q8NEP3 725 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 OR51A2Q8NGJ7 313 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 PP6455Q8WZ26 134 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 SOSTQ9BQB4 213 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 OPN3Q9H1Y3 402 aaPredicted RBP10.44□□□□□ -0.74
USF1-203ENST00000368021 CYSLTR2Q9NS75 346 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 ZNF629Q9UEG4 869 aaPredicted RBP10.44□□□□□ -0.74
USF1-203ENST00000368021 SCP2D1Q9UJQ7 156 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 ETV7Q9Y603 341 aa10.44□□□□□ -0.74
USF1-203ENST00000368021 SPTBN1Q01082 2364 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms