RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 LIPHQ8WWY8 451 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 C5orf30Q96GV9 206 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 FKBP11Q9NYL4 201 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 FLRT3Q9NZU0 649 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 CLCF1Q9UBD9 225 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 KCNG2Q9UJ96 466 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 ZNF727A8MUV8 499 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 GREM1O60565 184 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 FUT1P19526 365 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 GABRA5P31644 462 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 SUMO3P55854 103 aaPredicted RBP7.78□□□□□ -1.16
SYNE1-206ENST00000367253 LHFPL2Q6ZUX7 228 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 FA2HQ7L5A8 372 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 C1orf174Q8IYL3 243 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 ZNF511Q8NB15 262 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 MRPS24Q96EL2 167 aaKnown RBP7.78□□□□□ -1.16
SYNE1-206ENST00000367253 MRGPRX4Q96LA9 322 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 LYRM4Q9HD34 91 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 EXOSC3Q9NQT5 275 aaKnown RBP7.78□□□□□ -1.16
SYNE1-206ENST00000367253 RIMS3Q9UJD0 308 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 PPIL1Q9Y3C6 166 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 ECM29Q5VYK3 1845 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 TRAV36DV7A0A075B6V5 113 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 A6NDN8 102 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 CXCL13O43927 109 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 CD14P08571 375 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 RPS4XP62701 263 aaKnown RBP7.78□□□□□ -1.16
SYNE1-206ENST00000367253 NAAAQ02083 359 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 PLAC9Q5JTB6 97 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 IGDCC3Q8IVU1 814 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 UBE2DNLQ8IWF7 75 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 NPEPL1Q8NDH3 523 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 OR8J2Q8NGG1 315 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 STARD4Q96DR4 205 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 C4orf36Q96KX1 117 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 LINC00052Q96N35 136 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 RAXQ9Y2V3 346 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 OOEPA6NGQ2 149 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 NPIPB15A6NHN6 443 aaPredicted RBP7.78□□□□□ -1.16
SYNE1-206ENST00000367253 CD1EP15812 388 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 SPNP16150 400 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 PNLIPP16233 465 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 ZNF154Q13106 437 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 CD300LGQ6UXG3 332 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 SIAH3Q8IW03 269 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 C17orf78Q8N4C9 275 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 C1orf162Q8NEQ5 155 aaPredicted RBP7.78□□□□□ -1.16
SYNE1-206ENST00000367253 OR52N5Q8NH56 324 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 TVP23CQ96ET8 276 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 SLC35E1Q96K37 410 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 C20orf85Q9H1P6 137 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 DCAF13Q9NV06 445 aaKnown RBP7.78□□□□□ -1.16
SYNE1-206ENST00000367253 LAMP3Q9UQV4 416 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 GPR45Q9Y5Y3 372 aa7.78□□□□□ -1.16
SYNE1-206ENST00000367253 PHIPQ8WWQ0 1821 aa7.77□□□□□ -1.16
SYNE1-206ENST00000367253 PAPPA2Q9BXP8 1791 aa7.77□□□□□ -1.16
SYNE1-206ENST00000367253 FAM181BA6NEQ2 426 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 JTBO76095 146 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 AIFM1O95831 613 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 AADACP22760 399 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 PSMB10P40306 273 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 DUSP2Q05923 314 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 GABRA6Q16445 453 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 SBSNQ6UWP8 590 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 DLL4Q9NR61 685 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 SS18L2Q9UHA2 77 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 ZNF337Q9Y3M9 751 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 NEUROG3Q9Y4Z2 214 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 DNAJC15Q9Y5T4 150 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 TMED7-TICAM2A0A0A6YYA0 188 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 ADRA1AP35348 466 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 SPRED3Q2MJR0 410 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 AADACL3Q5VUY0 350 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 TMEM135Q86UB9 458 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 PTPMT1Q8WUK0 201 aaPredicted RBP7.77□□□□□ -1.17
SYNE1-206ENST00000367253 ST8SIA1Q92185 356 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 ISOC2Q96AB3 205 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 R3HDM4Q96D70 268 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 PDXPQ96GD0 296 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 LPAR5Q9H1C0 372 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 GTSF1LQ9H1H1 148 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 FGF22Q9HCT0 170 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 SDR39U1Q9NRG7 319 aaPredicted RBP7.77□□□□□ -1.17
SYNE1-206ENST00000367253 TMED7Q9Y3B3 224 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 TCRBV3S1A0A5B6 114 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 LEUTXA8MZ59 168 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 SMIM17P0DL12 118 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 ACP2P11117 423 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 TNFAIP6P98066 277 aaPredicted RBP7.77□□□□□ -1.17
SYNE1-206ENST00000367253 ZNF322Q6U7Q0 402 aaPredicted RBP7.77□□□□□ -1.17
SYNE1-206ENST00000367253 CYS1Q717R9 158 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 OR4X2Q8NGF9 303 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 MOB3AQ96BX8 217 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 UCK1Q9HA47 277 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 TEX50A0A1B0GTY4 177 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 A0A1W2PN81 502 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 GJB3O75712 270 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 RHBDL1O75783 438 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 SNRPBP14678 240 aaKnown RBP7.77□□□□□ -1.17
SYNE1-206ENST00000367253 JUNBP17275 347 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms