RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 MAML2Q8IZL2 1156 aaPredicted RBP12.36□□□□□ -0.43
COL6A1-201ENST00000361866 ARHGEF39Q8N4T4 335 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 ALKBH3Q96Q83 286 aaPredicted RBP12.36□□□□□ -0.43
COL6A1-201ENST00000361866 TOLLIPQ9H0E2 274 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 MIOXQ9UGB7 285 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 A0A1W2PPC1 479 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 BCAT2O15382 392 aaPredicted RBP12.36□□□□□ -0.43
COL6A1-201ENST00000361866 CDC14BO60729 498 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 SCGB1D1O95968 90 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 HBE1P02100 147 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 ICAM2P13598 275 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 EFNB1P98172 346 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 C19orf12Q9NSK7 152 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 KCNIP1Q9NZI2 227 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 OR5AC2Q9NZP5 309 aa12.36□□□□□ -0.43
COL6A1-201ENST00000361866 C7orf77A4D0Y5 90 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 WDR1O75083 606 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 MRPL33O75394 65 aaKnown RBP12.35□□□□□ -0.43
COL6A1-201ENST00000361866 C1QL1O75973 258 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 MUC1P15941 1255 aaPredicted RBP12.35□□□□□ -0.43
COL6A1-201ENST00000361866 Q7L0L9 218 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 CATSPERDQ86XM0 798 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 LINC00518Q8N0U6 118 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 WASF3Q9UPY6 502 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 RCL1Q9Y2P8 373 aaKnown RBP12.35□□□□□ -0.43
COL6A1-201ENST00000361866 A0A1W2PPE2 198 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 GJE1A6NN92 205 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 CDRT15L2A8MXV6 281 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 YKT6O15498 198 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 FAM157BP0CG42 384 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 RAC2P15153 192 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 B4GALT1P15291 398 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 IL11P20809 199 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 OR2B11Q5JQS5 317 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 FAM209BQ5JX69 171 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 LFNGQ8NES3 379 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 MOB1AQ9H8S9 216 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 CRLF2Q9HC73 371 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 TRAPPC2LQ9UL33 140 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 FAM24AA6NFZ4 105 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 TUSC2O75896 110 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 OR5AC1P0C628 307 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 MLF1P58340 268 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 RPUSD4Q96CM3 377 aaKnown RBP12.35□□□□□ -0.43
COL6A1-201ENST00000361866 CFHR5Q9BXR6 569 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 CRISPLD2Q9H0B8 497 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 ALX4Q9H161 411 aaPredicted RBP12.35□□□□□ -0.43
COL6A1-201ENST00000361866 GAR1Q9NY12 217 aaKnown RBP12.35□□□□□ -0.43
COL6A1-201ENST00000361866 PATJQ8NI35 1801 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 OR2M5A3KFT3 312 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 IAPPP10997 89 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 GLULP15104 373 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 CXCL12P48061 93 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 ISXQ2M1V0 245 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 OR2T2Q6IF00 324 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 FIP1L1Q6UN15 594 aaKnown RBP12.35□□□□□ -0.43
COL6A1-201ENST00000361866 OR10G3Q8NGC4 313 aa12.35□□□□□ -0.43
COL6A1-201ENST00000361866 TRBV5-5A0A0J9YX44 114 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 TNFSF14O43557 240 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 LY86O95711 162 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 NRASP01111 189 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 MT-ND4LP03901 98 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 CARD18P57730 90 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 FUT7Q11130 342 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 SPANXN5Q5MJ07 72 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 OR8B12Q8NGG6 310 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 CPT1CQ8TCG5 803 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 GPBAR1Q8TDU6 330 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 GNRHR2Q96P88 292 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 CALHM2Q9HA72 323 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 GCM1Q9NP62 436 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 KLF15Q9UIH9 416 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 A0A096LPE4 126 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 A0A1W2PPZ6 126 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 OR5H15A6NDH6 313 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 ANKRD30BLA7E2S9 258 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 SERPINE3A8MV23 424 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 HMGB3O15347 200 aaKnown RBP12.34□□□□□ -0.43
COL6A1-201ENST00000361866 CD27P26842 260 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 OR2A2Q6IF42 318 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 JMJD6Q6NYC1 403 aaPredicted RBP12.34□□□□□ -0.43
COL6A1-201ENST00000361866 ABCA7Q8IZY2 2146 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 PRO1933Q9H354 126 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 ZNF727A8MUV8 499 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 CYTIPO60759 359 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 ASAH2BP0C7U1 165 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 EIF1P41567 113 aaKnown RBP12.34□□□□□ -0.43
COL6A1-201ENST00000361866 SHBQ15464 509 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 SLC26A10Q8NG04 563 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 PTPMT1Q8WUK0 201 aaPredicted RBP12.34□□□□□ -0.43
COL6A1-201ENST00000361866 MRPL24Q96A35 216 aaKnown RBP12.34□□□□□ -0.43
COL6A1-201ENST00000361866 TM4SF19Q96DZ7 209 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 NRIP2Q9BQI9 281 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 CABLES2Q9BTV7 478 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 SLCO1B1Q9Y6L6 691 aa12.34□□□□□ -0.43
COL6A1-201ENST00000361866 A0A1W2PPV4 95 aa12.33□□□□□ -0.44
COL6A1-201ENST00000361866 RAB27BO00194 218 aa12.33□□□□□ -0.44
COL6A1-201ENST00000361866 DHHO43323 396 aa12.33□□□□□ -0.44
COL6A1-201ENST00000361866 ECI1P42126 302 aa12.33□□□□□ -0.44
COL6A1-201ENST00000361866 KIR2DL1P43626 348 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms