RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 A0A1B0GVC2 190 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 A0A1W2PPQ1 181 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 URADA6NGE7 173 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 UMODP07911 640 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 CXCL1P09341 107 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 VSIG8P0DPA2 414 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 TDGF1P13385 188 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 OR10J1P30954 320 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 BUD31P41223 144 aaPredicted RBP3.95□□□□□ -1.78
PTPN22-201ENST00000359785 DHPSP49366 369 aaPredicted RBP3.95□□□□□ -1.78
PTPN22-201ENST00000359785 CDK3Q00526 305 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 TWF1Q12792 350 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 C10orf128Q5T292 105 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 ASTLQ6HA08 431 aaPredicted RBP3.95□□□□□ -1.78
PTPN22-201ENST00000359785 SLC18B1Q6NT16 456 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 ARMC6Q6NXE6 501 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 RPUSD3Q6P087 351 aaKnown RBP3.95□□□□□ -1.78
PTPN22-201ENST00000359785 B3GLCTQ6Y288 498 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 PARS2Q7L3T8 475 aaKnown RBP3.95□□□□□ -1.78
PTPN22-201ENST00000359785 KCNG3Q8TAE7 436 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 MYLIPQ8WY64 445 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 DCUN1D4Q92564 292 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 HAS2Q92819 552 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 RAB8BQ92930 207 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 C11orf52Q96A22 123 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 APOBEC3DQ96AK3 386 aaPredicted RBP3.95□□□□□ -1.78
PTPN22-201ENST00000359785 RAB39BQ96DA2 213 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 CCDC3Q9BQI4 270 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 MIEN1Q9BRT3 115 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 RBKSQ9H477 322 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 HHLA2Q9UM44 414 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 INSL6Q9Y581 213 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 INSL5Q9Y5Q6 135 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 ZNF780BQ9Y6R6 833 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 EP400Q96L91 3159 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 LOC100509620A0A075B734 347 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 IGKV3D-11A0A0A0MRZ8 115 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 CLDN34H7C241 214 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 C1QL1O75973 258 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 TOXO94900 526 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 TNFSF15O95150 251 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 GPR75O95800 540 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 AMY2AP04746 511 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 SNRNP70P08621 437 aaKnown RBP3.95□□□□□ -1.78
PTPN22-201ENST00000359785 AREGP15514 252 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 ZNF14P17017 642 aaPredicted RBP3.95□□□□□ -1.78
PTPN22-201ENST00000359785 HNRNPA2B1P22626 353 aaKnown RBP3.95□□□□□ -1.78
PTPN22-201ENST00000359785 PTGER4P35408 488 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 EIF4EBP1Q13541 118 aaPredicted RBP3.95□□□□□ -1.78
PTPN22-201ENST00000359785 TCTN1Q2MV58 587 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 PRTGQ2VWP7 1150 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 PRAMEF17Q5VTA0 474 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 CLEC9AQ6UXN8 241 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 TMPPEQ6ZT21 453 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 CFAP52Q8N1V2 620 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 APCDD1LQ8NCL9 501 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 OR51G1Q8NGK1 321 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 ASB10Q8WXI3 467 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 OR10C1Q96KK4 312 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 PDCD1LG2Q9BQ51 273 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 RERGLQ9H628 205 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 PARD6AQ9NPB6 346 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 B9D1Q9UPM9 204 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 RCL1Q9Y2P8 373 aaKnown RBP3.95□□□□□ -1.78
PTPN22-201ENST00000359785 HS3ST3B1Q9Y662 390 aa3.95□□□□□ -1.78
PTPN22-201ENST00000359785 TRAV36DV7A0A075B6V5 113 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 A0A1B0GV90 55 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 PRSS37A4D1T9 235 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 C1QTNF9BB2RNN3 333 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 G3V3Y1 287 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 H3BQ15 152 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 MED6O75586 246 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 FARS2O95363 451 aaKnown RBP3.94□□□□□ -1.78
PTPN22-201ENST00000359785 IGLV3-19P01714 112 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 RPLP1P05386 114 aaKnown RBP3.94□□□□□ -1.78
PTPN22-201ENST00000359785 HEXBP07686 556 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 CD63P08962 238 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 RAC2P15153 192 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 TCN2P20062 427 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 GLRA1P23415 457 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 BRS3P32247 399 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 CLDN6P56747 220 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 RPS26P62854 115 aaKnown RBP3.94□□□□□ -1.78
PTPN22-201ENST00000359785 HLA-DRB3P79483 266 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 TLE2Q04725 743 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 TMEM220Q6QAJ8 160 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 ZNF627Q7L945 461 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 PPP1R3BQ86XI6 285 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 ZNF295-AS1Q8N0V1 137 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 CA13Q8N1Q1 262 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 TCTEX1D1Q8N7M0 179 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 ADAD2Q8NCV1 583 aaKnown RBP3.94□□□□□ -1.78
PTPN22-201ENST00000359785 OR14K1Q8NGZ2 314 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 PPP1R35Q8TAP8 253 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 ELSPBP1Q96BH3 223 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 C16orf58Q96GQ5 468 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 LURAP1Q96LR2 239 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 TNFRSF13CQ96RJ3 184 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 TMEM204Q9BSN7 226 aa3.94□□□□□ -1.78
PTPN22-201ENST00000359785 CABLES2Q9BTV7 478 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms