RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 CNEP1R1Q8N9A8 125 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 HDAC8Q9BY41 377 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 PRAMEF25A6NGN4 478 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 EN2P19622 333 aaPredicted RBP7.9□□□□□ -1.14
COL6A6-201ENST00000358511 GPM6AP51674 278 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 MVDP53602 400 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 RAB32Q13637 225 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 RUNX3Q13761 415 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 KLF9Q13886 244 aaPredicted RBP7.9□□□□□ -1.14
COL6A6-201ENST00000358511 PRAMEF5Q5TYX0 476 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 PRAMEF6Q5VXH4 476 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 DRAM2Q6UX65 266 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 CISD2Q8N5K1 135 aaKnown RBP7.9□□□□□ -1.14
COL6A6-201ENST00000358511 OTOSQ8NHW6 89 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 ADGRG7Q96K78 797 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 GDE1Q9NZC3 331 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 ZNF346Q9UL40 294 aaKnown RBP7.9□□□□□ -1.14
COL6A6-201ENST00000358511 SLC17A4Q9Y2C5 497 aa7.9□□□□□ -1.14
COL6A6-201ENST00000358511 GVINP1Q7Z2Y8 2422 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 ADAMTS7Q9UKP4 1686 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 PQLC2LA1A4F0 135 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 SFT2D2O95562 160 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 HMGA2P52926 109 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 SLC25A30Q5SVS4 291 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 TAS1R1Q7RTX1 841 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 BLNKQ8WV28 456 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 CHST6Q9GZX3 395 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 BOKQ9UMX3 212 aaPredicted RBP7.9□□□□□ -1.15
COL6A6-201ENST00000358511 FAM74A7A6NL05 159 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 TOX3O15405 576 aaPredicted RBP7.9□□□□□ -1.15
COL6A6-201ENST00000358511 NMBP08949 121 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 ARG2P78540 354 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 MYBPHQ13203 477 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 ATP5SQ99766 215 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 C1QTNF6Q9BXI9 259 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 LIPGQ9Y5X9 500 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 PLXND1Q9Y4D7 1925 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 M0R135 149 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 GCGP01275 180 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 SLC37A1P57057 533 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 PP6455Q8WZ26 134 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 ZNF799Q96GE5 643 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 METTL1Q9UBP6 276 aaKnown RBP7.9□□□□□ -1.15
COL6A6-201ENST00000358511 ST3GAL6Q9Y274 331 aa7.9□□□□□ -1.15
COL6A6-201ENST00000358511 ZNF732B4DXR9 585 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 DAOP14920 347 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 BCORP1Q8N888 145 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 STARD4Q96DR4 205 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 OR8B4Q96RC9 309 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 RASL12Q9NYN1 266 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 PCDHGA9Q9Y5G4 932 aaKnown RBP7.89□□□□□ -1.15
COL6A6-201ENST00000358511 YIF1AO95070 293 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 HRASP01112 189 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 KRASP01116 189 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 CRISP2P16562 243 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 ADPRHL1Q8NDY3 354 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 RRP8O43159 456 aaKnown RBP7.89□□□□□ -1.15
COL6A6-201ENST00000358511 CYC1P08574 325 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 NHLH1Q02575 133 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 RTL10Q7L3V2 364 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 MIXL1Q9H2W2 232 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 WSB2Q9NYS7 404 aaPredicted RBP7.89□□□□□ -1.15
COL6A6-201ENST00000358511 KCND3Q9UK17 655 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 DAPP1Q9UN19 280 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 TRPM7Q96QT4 1865 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 BMPR1BO00238 502 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 TIMM8AO60220 97 aaPredicted RBP7.89□□□□□ -1.15
COL6A6-201ENST00000358511 IFITM2Q01629 132 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 TMEM267Q0VDI3 215 aaPredicted RBP7.89□□□□□ -1.15
COL6A6-201ENST00000358511 ORAI1Q96D31 301 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 RHOVQ96L33 236 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 DECR2Q9NUI1 292 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 SERTM2A0A1B0GWG4 89 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 ZNF815PA8K554 130 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 IGHA1P01876 353 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 IL3RAP26951 378 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 AAED1Q7RTV5 226 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 UBE3DQ7Z6J8 389 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 ANGPTL4Q9BY76 406 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 COL24A1Q17RW2 1714 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 LOC105371267A0A1B0GV96 52 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 LNP1A1A4G5 178 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 H3BP45 60 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 H3BQ15 152 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 TMPRSS11DO60235 418 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 CNIH1O95406 144 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 CHRNA7P36544 502 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 CDC34P49427 236 aaPredicted RBP7.89□□□□□ -1.15
COL6A6-201ENST00000358511 TRMT12Q53H54 448 aaKnown RBP7.89□□□□□ -1.15
COL6A6-201ENST00000358511 C8orf82Q6P1X6 216 aaPredicted RBP7.89□□□□□ -1.15
COL6A6-201ENST00000358511 MARCH3Q86UD3 253 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 PCNX1Q96RV3 2341 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 GEMIN2O14893 280 aaKnown RBP7.89□□□□□ -1.15
COL6A6-201ENST00000358511 OR3A1P47881 315 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 TAS2R60P59551 318 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 SPCS3P61009 180 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 CTBSQ01459 385 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 SLC25A42Q86VD7 318 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 SLC39A11Q8N1S5 342 aa7.89□□□□□ -1.15
COL6A6-201ENST00000358511 C17orf47Q8NEP4 570 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms