RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 CST11Q9H112 138 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 GLS2Q9UI32 602 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 KCNK7Q9Y2U2 307 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 TENM4Q6N022 2769 aa12.5□□□□□ -0.41
NIPAL3-203ENST00000358028 MED12Q93074 2177 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 LRRC3CA6NJW4 275 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 CEACAM18A8MTB9 384 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 CDC14BO60729 498 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 SERPINA7P05543 415 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 CSN2P05814 226 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 GNB3P16520 340 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 THBS4P35443 961 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 ALDH3B1P43353 468 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 IL13RA1P78552 427 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 ACER2Q5QJU3 275 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 ACOT7LQ6ZUV0 252 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 GGNQ86UU5 652 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 GVQW1Q8N7I0 195 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 OR4K15Q8NH41 348 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 ST8SIA2Q92186 375 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 SCGB3A2Q96PL1 93 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 OCSTAMPQ9BR26 566 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 NICN1Q9BSH3 213 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 TMEM59Q9BXS4 323 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 DNTTIP1Q9H147 329 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 FLVCR1Q9Y5Y0 555 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 V9GYS6 101 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 NCKAP5O14513 1909 aa12.49□□□□□ -0.41
NIPAL3-203ENST00000358028 A0A0A6YYD4 124 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 A0A0B4J2A0 478 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 IGKV1-9A0A0C4DH69 117 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 A0A0U1RQV5 110 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 F5H5K5 113 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 BET1O15155 118 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 MPIG6BO95866 241 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 APOC1P02654 83 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 PRF1P14222 555 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 SLC6A9P48067 706 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 MRPS34P82930 218 aaKnown RBP12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 ECH1Q13011 328 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 ARL6IP1Q15041 203 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 OR52W1Q6IF63 320 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 JMJD6Q6NYC1 403 aaPredicted RBP12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 C17orf107Q6ZR85 190 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 Q6ZSR3 168 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 PNLDC1Q8NA58 520 aaKnown RBP12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 GALNT11Q8NCW6 608 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 BVESQ8NE79 360 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 OR1S1Q8NH92 325 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 FBXW5Q969U6 566 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 GPER1Q99527 375 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 SHPKQ9UHJ6 478 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 OR2AT4A6NND4 320 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 RFPL3SP0C7P2 107 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 OTX1P32242 354 aaPredicted RBP12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 CCL11P51671 97 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 RRADP55042 308 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 CARD18P57730 90 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 CYCSP99999 105 aaKnown RBP12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 RSPO1Q2MKA7 263 aaPredicted RBP12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 SLC22A6Q4U2R8 563 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 FAM27BQ5VT28 67 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 RTN4RL2Q86UN3 420 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 FAM89BQ8N5H3 189 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 TMEM104Q8NE00 496 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 TERB2Q8NHR7 220 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 THAP6Q8TBB0 222 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 C10orf35Q96D05 121 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 FBXO17Q96EF6 278 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 FER1L6-AS2Q96M78 137 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 RASL12Q9NYN1 266 aa12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 ZNF230Q9UIE0 474 aaPredicted RBP12.48□□□□□ -0.41
NIPAL3-203ENST00000358028 LOC105371267A0A1B0GV96 52 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 DBX1A6NMT0 343 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 M0R135 149 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 MFNGO00587 321 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 CA11O75493 328 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 DHRS3O75911 302 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 SPDEFO95238 335 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 RLN2P04090 185 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 TAGLNQ01995 201 aaKnown RBP12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 WIPI1Q5MNZ9 446 aaPredicted RBP12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 NSUN5P2Q63ZY6 315 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 RTL6Q6ICC9 239 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 TMEM185AQ8NFB2 350 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 PXT1Q8NFP0 134 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 FDCSPQ8NFU4 85 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 OR2V1Q8NHB1 315 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 PPP1R1CQ8WVI7 109 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 PP6455Q8WZ26 134 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 ST8SIA4Q92187 359 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 SPTSSAQ969W0 71 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 ZNF837Q96EG3 531 aaPredicted RBP12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 ZNF799Q96GE5 643 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 ABHD17AQ96GS6 310 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 VRK1Q99986 396 aaPredicted RBP12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 BANF2Q9H503 90 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 DEPPQ9NTK1 212 aa12.47□□□□□ -0.41
NIPAL3-203ENST00000358028 PLEK2Q9NYT0 353 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms