RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 STAC2Q6ZMT1 411 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 TMUB2Q71RG4 321 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 PROB1E7EW31 1015 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 SOCS1O15524 211 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 RHBDL1O75783 438 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 HSPB1P04792 205 aaKnown RBP6.53□□□□□ -1.36
VPS13A-202ENST00000357409 SCGB1C2P0DMR2 95 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 ATF1P18846 271 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 CCR5P51681 352 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 SLC35B1P78383 322 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 TEX101Q9BY14 249 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 WDR13Q9H1Z4 485 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 WNT16Q9UBV4 365 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 PRR19A6NJB7 356 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 UBBP0CG47 229 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 CD200P41217 278 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 BTNL8Q6UX41 500 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 PXT1Q8NFP0 134 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 OR10A7Q8NGE5 316 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 OR10Z1Q8NGY1 313 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 NDFIP1Q9BT67 221 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 OR2J1Q9GZK6 312 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 S1PR5Q9H228 398 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 NTN4Q9HB63 628 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 FAM212BQ9NTI7 297 aaPredicted RBP6.53□□□□□ -1.36
VPS13A-202ENST00000357409 ZDHHC8Q9ULC8 765 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 H7C2G1 150 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 CALCRP30988 508 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 CASP3P42574 277 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 RAE1P78406 368 aaKnown RBP6.53□□□□□ -1.36
VPS13A-202ENST00000357409 SLC17A1Q14916 467 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 SLC25A53Q5H9E4 307 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 ZNF425Q6IV72 752 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 ADGRE4PQ86SQ3 457 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 TMEM37Q8WXS4 190 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 ZNF436Q9C0F3 470 aaPredicted RBP6.53□□□□□ -1.36
VPS13A-202ENST00000357409 OR5V1Q9UGF6 321 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 B3GALT5Q9Y2C3 310 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 NOVP48745 357 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 SLC25A30Q5SVS4 291 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 IL22RA2Q969J5 263 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 ZNF385AQ96PM9 386 aaKnown RBP6.53□□□□□ -1.36
VPS13A-202ENST00000357409 ZNF768Q9H5H4 540 aaKnown RBP6.53□□□□□ -1.36
VPS13A-202ENST00000357409 LYRM4Q9HD34 91 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 RIPPLY3P57055 190 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 MFSD4AQ8N468 514 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 FOXC2Q99958 501 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 POMT2Q9UKY4 750 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 TNFRSF10CO14798 259 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 TNFSF14O43557 240 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 SPNP16150 400 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 KISS1Q15726 138 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 DGAT2L6Q6ZPD8 337 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 EPPINO95925 133 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 PCBP4P57723 403 aaKnown RBP6.53□□□□□ -1.36
VPS13A-202ENST00000357409 IGFBP7Q16270 282 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 LHX4Q969G2 390 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 ABHD14BQ96IU4 210 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 IL17BQ9UHF5 180 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 HSPE1-MOB4S4R3N1 261 aa6.53□□□□□ -1.36
VPS13A-202ENST00000357409 A0A087WZY1 265 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 OR2C1O95371 312 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 CDKN2AP42771 156 aaKnown RBP6.52□□□□□ -1.37
VPS13A-202ENST00000357409 POLR2GP62487 172 aaKnown RBP eCLIP6.52□□□□□ -1.37
VPS13A-202ENST00000357409 ZNF239Q16600 458 aaKnown RBP6.52□□□□□ -1.37
VPS13A-202ENST00000357409 PIGYQ3MUY2 71 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 WDR38Q5JTN6 314 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 DGAT2L7PQ6IED9 249 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 TMEM52Q8NDY8 209 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 SSMEM1Q8WWF3 244 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 POM121L2Q96KW2 1035 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 TXLNGYQ9BZA5 131 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 WASHC3Q9Y3C0 194 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 CORINQ9Y5Q5 1042 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 F2RL2O00254 374 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 ADAP1O75689 374 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 KLF3P57682 345 aaPredicted RBP6.52□□□□□ -1.37
VPS13A-202ENST00000357409 TMEM102Q8N9M5 508 aaPredicted RBP6.52□□□□□ -1.37
VPS13A-202ENST00000357409 PEAR1Q5VY43 1037 aaPredicted RBP6.52□□□□□ -1.37
VPS13A-202ENST00000357409 MRGPRX3Q96LB0 322 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 RASL10BQ96S79 203 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 R4GMQ9 66 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 ARHGEF28Q8N1W1 1705 aaKnown RBP6.52□□□□□ -1.37
VPS13A-202ENST00000357409 MUC21A0A0G2JKD1 596 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 MUC21A0A140T8X8 626 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 ST8SIA3O43173 380 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 MUC21Q5SSG8 566 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 OR5D13Q8NGL4 314 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 SRD5A3Q9H8P0 318 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 STRAPQ9Y3F4 350 aaKnown RBP6.52□□□□□ -1.37
VPS13A-202ENST00000357409 NWD2Q9ULI1 1742 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 OR2M5A3KFT3 312 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 ZNF716A6NP11 495 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 TFF1P04155 84 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 EPHA8P29322 1005 aaPredicted RBP6.52□□□□□ -1.37
VPS13A-202ENST00000357409 HCP5Q6MZN7 132 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 KIR3DL3Q8N743 410 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 OR5AP2Q8NGF4 316 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 SAP30LQ9HAJ7 183 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 ZMAT5Q9UDW3 170 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms