RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 OR1L3Q8NH93 324 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 MTCH1Q9NZJ7 389 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 OR5V1Q9UGF6 321 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 MTCH2Q9Y6C9 303 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 CTAG2O75638 210 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 NXPH3O95157 252 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 RHBDD2Q6NTF9 364 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 OR52N4Q8NGI2 321 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 OR13D1Q8NGV5 346 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 TSPAN32Q96QS1 320 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 TINAGL1Q9GZM7 467 aaPredicted RBP10.5□□□□□ -0.73
COL9A1-202ENST00000357250 ZFP64Q9NPA5 681 aa10.5□□□□□ -0.73
COL9A1-202ENST00000357250 AKR7A2O43488 359 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 DUS4LO95620 317 aaKnown RBP10.49□□□□□ -0.73
COL9A1-202ENST00000357250 IGHA1P01876 353 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 FOSL1P15407 271 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 OR2B8PP59922 312 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 NCR3LG1Q68D85 454 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 SSX9Q7RTT3 188 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 OR6X1Q8NH79 312 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 ALKBH3Q96Q83 286 aaPredicted RBP10.49□□□□□ -0.73
COL9A1-202ENST00000357250 ZNF586Q9NXT0 402 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 URGCP-MRPS24S4R325 110 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 LTBP1Q14766 1721 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 OR5B21A6NL26 309 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 TNFSF14O43557 240 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 B3GALNT1O75752 331 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 DUSP2Q05923 314 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 TMEM92Q6UXU6 159 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 ZFP62Q8NB50 900 aaPredicted RBP10.49□□□□□ -0.73
COL9A1-202ENST00000357250 RELL2Q8NC24 303 aaPredicted RBP10.49□□□□□ -0.73
COL9A1-202ENST00000357250 OR5B3Q8NH48 314 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 AKR7LQ8NHP1 331 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 ROBO4Q8WZ75 1007 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 ERGIC1Q969X5 290 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 POM121L2Q96KW2 1035 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 LURAP1Q96LR2 239 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 ZNF251Q9BRH9 671 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 CCL27Q9Y4X3 112 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 POMT1Q9Y6A1 747 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 TMEM272A0A1B0GTI8 110 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 RAB27BO00194 218 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 PLPP3O14495 311 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 PDCD6O75340 191 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 ZBTB25P24278 435 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 BAMBIQ13145 260 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 SSPNQ14714 243 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 TMEM123Q8N131 208 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 M1APQ8TC57 530 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 TMEM18Q96B42 140 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 GINS3Q9BRX5 216 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 EDEM2Q9BV94 578 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 SF3B5Q9BWJ5 86 aaKnown RBP10.49□□□□□ -0.73
COL9A1-202ENST00000357250 RHOFQ9HBH0 211 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 NIT2Q9NQR4 276 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 SLC35D1Q9NTN3 355 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 PCOLCE2Q9UKZ9 415 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 RCL1Q9Y2P8 373 aaKnown RBP10.49□□□□□ -0.73
COL9A1-202ENST00000357250 FAM221AA4D161 298 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 HPP00738 406 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 GLI4P10075 376 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 LSM6P62312 80 aaKnown RBP10.49□□□□□ -0.73
COL9A1-202ENST00000357250 IL13RA2Q14627 380 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 DEFB123Q8N688 67 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 NPEPL1Q8NDH3 523 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 CLDN23Q96B33 292 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 MMP26Q9NRE1 261 aa10.49□□□□□ -0.73
COL9A1-202ENST00000357250 IGHV3-15A0A0B4J1V0 119 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 ANKRD20A5PA0PJZ0 165 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 SOX15O60248 233 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 HRASP01112 189 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 FAM157BP0CG42 384 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 SPNP16150 400 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 RPS16P62249 146 aaKnown RBP10.48□□□□□ -0.73
COL9A1-202ENST00000357250 OR1C1Q15619 314 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 ZNF574Q6ZN55 896 aaPredicted RBP10.48□□□□□ -0.73
COL9A1-202ENST00000357250 ZC3HAV1LQ96H79 300 aaKnown RBP10.48□□□□□ -0.73
COL9A1-202ENST00000357250 C20orf24Q9BUV8 137 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 GAR1Q9NY12 217 aaKnown RBP10.48□□□□□ -0.73
COL9A1-202ENST00000357250 ICAM5Q9UMF0 924 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 IGHV5-51A0A0C4DH38 117 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 M0R1B8 84 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 GUCA2AQ02747 115 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 DHRS2Q13268 280 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 RPL7L1Q6DKI1 246 aaKnown RBP10.48□□□□□ -0.73
COL9A1-202ENST00000357250 NHLRC1Q6VVB1 395 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 ZNF705AQ6ZN79 300 aaPredicted RBP10.48□□□□□ -0.73
COL9A1-202ENST00000357250 GPR119Q8TDV5 335 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 PARP12Q9H0J9 701 aaKnown RBP10.48□□□□□ -0.73
COL9A1-202ENST00000357250 P4HTMQ9NXG6 502 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 CHEK1O14757 476 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 EPHA8P29322 1005 aaPredicted RBP10.48□□□□□ -0.73
COL9A1-202ENST00000357250 CDKN2AP42771 156 aaKnown RBP10.48□□□□□ -0.73
COL9A1-202ENST00000357250 CLRN3Q8NCR9 226 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 NEIL1Q96FI4 390 aaPredicted RBP10.48□□□□□ -0.73
COL9A1-202ENST00000357250 PLEKHB1Q9UF11 243 aaPredicted RBP10.48□□□□□ -0.73
COL9A1-202ENST00000357250 SHISA7A6NL88 538 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 OR7C2O60412 319 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 WNT1P04628 370 aa10.48□□□□□ -0.73
COL9A1-202ENST00000357250 CLEC3BP05452 202 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms