RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 RPL36A-HNRNPH2H7BZ11 118 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 TNFRSF10CO14798 259 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 SOCS1O15524 211 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 SEMA4FO95754 770 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 MELTFP08582 738 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 METTL15P1P0C7V9 234 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 RAB32Q13637 225 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 UBE2V2Q15819 145 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 PRTGQ2VWP7 1150 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 RPL7L1Q6DKI1 246 aaKnown RBP7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 ETFRF1Q6IPR1 90 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 GLIPR1L1Q6UWM5 242 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 RABEPKQ7Z6M1 372 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 ADAMTS17Q8TE56 1095 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 LIPHQ8WWY8 451 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 RLN3Q8WXF3 142 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 RNF126Q9BV68 326 aa7.3□□□□□ -1.24
CDC42SE1-201ENST00000357235 IGHV5-51A0A0C4DH38 117 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 MED19A0JLT2 244 aaPredicted RBP7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 UMAD1C9J7I0 102 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 GIMD1P0DJR0 217 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 HKR1P10072 659 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 GLI4P10075 376 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 IGFBP3P17936 291 aaPredicted RBP7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 AMY2BP19961 511 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 RAB6AP20340 208 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 BCKDHBP21953 392 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 HSD11B1P28845 292 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 SLC6A8P48029 635 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 TDGF1P3P51864 188 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 ROM1Q03395 351 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR2T2Q6IF00 324 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 CLEC18BQ6UXF7 455 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 SLC22A24Q8N4F4 322 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 HSD17B11Q8NBQ5 300 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 CPEB3Q8NE35 698 aaKnown RBP7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 SLC26A10Q8NG04 563 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 G6PC2Q9NQR9 355 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 CYTL1Q9NRR1 136 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 OBP2AQ9NY56 170 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 TMEM210A6NLX4 147 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF724A8MTY0 619 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF705GA8MUZ8 300 aaPredicted RBP7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 A8MVM7 634 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 C9J4A7 227 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 PLPP3O14495 311 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF354AO60765 605 aaPredicted RBP7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 CLPSP04118 112 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 GLRA1P23415 457 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 CTHP32929 405 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 TNFRSF4P43489 277 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 ARL4DP49703 201 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 RPS23P62266 143 aaKnown RBP7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 TLE3Q04726 772 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 JOSD1Q15040 202 aaPredicted RBP7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 TMEM128Q5BJH2 165 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 DCAF10Q5QP82 559 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 FDX2Q6P4F2 183 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 BTNL8Q6UX41 500 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 NUP54Q7Z3B4 507 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 NKAIN3Q8N8D7 197 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZDHHC22Q8N966 263 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR5D14Q8NGL3 314 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF519Q8TB69 540 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 NEK7Q8TDX7 302 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 NTNG2Q96CW9 530 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR10C1Q96KK4 312 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 SLC46A1Q96NT5 459 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 TAF9BQ9HBM6 251 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF701Q9NV72 531 aaPredicted RBP7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 BRWD1Q9NSI6 2320 aa7.29□□□□□ -1.24
CDC42SE1-201ENST00000357235 CABIN1Q9Y6J0 2220 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 HSPB2A8KAH6 182 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR8U9P0C7N5 309 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 FOSL2P15408 326 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 RPS2P15880 293 aaKnown RBP7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 CDAP32320 146 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR3A4PP47883 348 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 POLR2HP52434 150 aaKnown RBP7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 CYCSP99999 105 aaKnown RBP7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF616Q08AN1 781 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 TRA2AQ13595 282 aaKnown RBP eCLIP7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 HSPB2Q16082 182 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF283Q8N7M2 679 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR5H2Q8NGV7 314 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR8U1Q8NH10 309 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 C22orf15Q8WYQ4 148 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 SLAMF6Q96DU3 332 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 THOC3Q96J01 351 aaKnown RBP7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 GABRG3Q99928 467 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 C5orf66Q9H5L9 145 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 COPS7AQ9UBW8 275 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 GAB2Q9UQC2 676 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 HDGFL3Q9Y3E1 203 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 LTBP2Q14767 1821 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 UNC13CQ8NB66 2214 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF878C9JN71 531 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 NUDT21O43809 227 aaKnown RBP7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF217O75362 1048 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF205O95201 554 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms