RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 UBCP0CG48 685 aaKnown RBP3.4□□□□□ -1.87
LIG4-201ENST00000356922 EGR1P18146 543 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 SRMP19623 302 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 TNFSF4P23510 183 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 GABRA5P31644 462 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 RPS19P39019 145 aaKnown RBP3.4□□□□□ -1.87
LIG4-201ENST00000356922 DDOSTP39656 456 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 CLDN12P56749 244 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 ARPC4P59998 168 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 MXD1Q05195 221 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 RIPPLY1Q0D2K3 151 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 PDCD1Q15116 288 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 YIF1BQ5BJH7 314 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 TMEM244Q5VVB8 128 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 THOC7Q6I9Y2 204 aaKnown RBP3.4□□□□□ -1.87
LIG4-201ENST00000356922 MOB3CQ70IA8 216 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 FGFRL1Q8N441 504 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 ZNF525Q8N782 197 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 ZBTB8BQ8NAP8 495 aaPredicted RBP3.4□□□□□ -1.87
LIG4-201ENST00000356922 GPR148Q8TDV2 347 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 ELMOD3Q96FG2 381 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 BARHL1Q9BZE3 327 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 CHST5Q9GZS9 411 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 RBM38Q9H0Z9 239 aaKnown RBP3.4□□□□□ -1.87
LIG4-201ENST00000356922 ISYNA1Q9NPH2 558 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 TMEM100Q9NV29 134 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 MTCH1Q9NZJ7 389 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 CKLFQ9UBR5 152 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 AK6Q9Y3D8 172 aaKnown RBP3.4□□□□□ -1.87
LIG4-201ENST00000356922 CEPT1Q9Y6K0 416 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 F8P00451 2351 aa3.4□□□□□ -1.87
LIG4-201ENST00000356922 A0A0G2JK05 382 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 ZNF732B4DXR9 585 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 B9A039 149 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 M0R233 179 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 AKR7A2O43488 359 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 CYB5R3P00387 301 aaPredicted RBP3.39□□□□□ -1.87
LIG4-201ENST00000356922 CST4P01036 141 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 SLC2A2P11168 524 aaPredicted RBP3.39□□□□□ -1.87
LIG4-201ENST00000356922 AMY2BP19961 511 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 ACHEP22303 614 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 SDC2P34741 201 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 MAP2K3P46734 347 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 GPR50Q13585 617 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 SPCS2Q15005 226 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 SFRP4Q6FHJ7 346 aaPredicted RBP3.39□□□□□ -1.87
LIG4-201ENST00000356922 OR10K2Q6IF99 312 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 MAPK1IP1LQ8NDC0 245 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 OR5T2Q8NGG2 359 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 OR4D6Q8NGJ1 314 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 NDNFQ8TB73 568 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 PERPQ96FX8 193 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 RNF170Q96K19 258 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 C1orf147Q96MC9 270 aaPredicted RBP3.39□□□□□ -1.87
LIG4-201ENST00000356922 MRPS26Q9BYN8 205 aaKnown RBP3.39□□□□□ -1.87
LIG4-201ENST00000356922 MOB1AQ9H8S9 216 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 MRPL15Q9P015 296 aaKnown RBP3.39□□□□□ -1.87
LIG4-201ENST00000356922 SCOCQ9UIL1 159 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 DHDHQ9UQ10 334 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.39□□□□□ -1.87
LIG4-201ENST00000356922 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.39□□□□□ -1.87
LIG4-201ENST00000356922 ZNF816-ZNF321PA0A0X1KG74 233 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 A0A1B0GVG6 124 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 PQLC2LA1A4F0 135 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 ISPDA4D126 451 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 J3QW42 95 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 TPPPO94811 219 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 CDRT1O95170 752 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 CD1AP06126 327 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 SFTPBP07988 381 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 IRF2P14316 349 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 RPL5P46777 297 aaKnown RBP3.39□□□□□ -1.87
LIG4-201ENST00000356922 OR3A4PP47883 348 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 EVX1P49640 407 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 PPP3R1P63098 170 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 CEACAM21Q3KPI0 293 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 AGAP6Q5VW22 663 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 MOGAT3Q86VF5 341 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 SERPINA12Q8IW75 414 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 SCCPDHQ8NBX0 429 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 OR10K1Q8NGX5 313 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 CCL17Q92583 94 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 MEGF10Q96KG7 1140 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 LURAP1Q96LR2 239 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 ADAT1Q9BUB4 502 aaKnown RBP3.39□□□□□ -1.87
LIG4-201ENST00000356922 SLITRK2Q9H156 845 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 OR51I2Q9H344 312 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 RGCCQ9H4X1 137 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 CNTD2Q9H8S5 307 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 PRELID1Q9Y255 219 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 TRDV1A0A1B0GX56 115 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 SSX4O60224 188 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 RP2O75695 350 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 CYB5AP00167 134 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 AZGP1P25311 298 aaKnown RBP3.39□□□□□ -1.87
LIG4-201ENST00000356922 DUSP1P28562 367 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 HAAOP46952 286 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 RIN1Q13671 783 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 KISS1Q15726 138 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 KIAA2026Q5HYC2 2103 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms