RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 HRH1P35367 487 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 TMEM50BP56557 158 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 QRFPP83859 136 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 C6orf201Q7Z4U5 140 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 TAAR6Q96RI8 345 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 SLC6A7Q99884 636 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 KCNMB2Q9Y691 235 aa15.3■□□□□ 0.04
NPAS3-202ENST00000356141 ZNF736B4DX44 427 aaPredicted RBP15.29■□□□□ 0.04
NPAS3-202ENST00000356141 HSPB6O14558 160 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 LILRA1O75019 489 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 LPLP06858 475 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 MGMTP16455 207 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 OTX1P32242 354 aaPredicted RBP15.29■□□□□ 0.04
NPAS3-202ENST00000356141 ZNF133P52736 654 aaPredicted RBP15.29■□□□□ 0.04
NPAS3-202ENST00000356141 ZP1P60852 638 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 TMEM95Q3KNT9 176 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 PLCXD3Q63HM9 321 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 PGAP1Q75T13 922 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 C5orf24Q7Z6I8 188 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 IFT46Q9NQC8 304 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 PRR13Q9NZ81 148 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 NPAP1Q9NZP6 1156 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 MRPS18CQ9Y3D5 142 aaKnown RBP15.29■□□□□ 0.04
NPAS3-202ENST00000356141 HSPB11Q9Y547 144 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 OR6C6A6NF89 314 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 AKAIN1P0CW23 69 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 BLVRBP30043 206 aaPredicted RBP15.29■□□□□ 0.04
NPAS3-202ENST00000356141 GSK3AP49840 483 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 BAMBIQ13145 260 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 ZNF260Q3ZCT1 412 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 BPIFB2Q8N4F0 458 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 OR10R2Q8NGX6 335 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 RAB3CQ96E17 227 aa15.29■□□□□ 0.04
NPAS3-202ENST00000356141 PAPOLGQ9BWT3 736 aaKnown RBP15.29■□□□□ 0.04
NPAS3-202ENST00000356141 ZNF780AO75290 641 aaPredicted RBP15.28■□□□□ 0.04
NPAS3-202ENST00000356141 AGFG2O95081 481 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 AGTR1P30556 359 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 HOXA4Q00056 320 aaPredicted RBP15.28■□□□□ 0.04
NPAS3-202ENST00000356141 FOXF2Q12947 444 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 PIGYQ3MUY2 71 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 VWA1Q6PCB0 445 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 DRAM2Q6UX65 266 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 RPRMLQ8N4K4 120 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 PNLDC1Q8NA58 520 aaKnown RBP15.28■□□□□ 0.04
NPAS3-202ENST00000356141 OR11H4Q8NGC9 324 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 FOXRED1Q96CU9 486 aaPredicted RBP15.28■□□□□ 0.04
NPAS3-202ENST00000356141 ZNF701Q9NV72 531 aaPredicted RBP15.28■□□□□ 0.04
NPAS3-202ENST00000356141 TOR1AO14656 332 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 SSX5O60225 188 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 ERCC1P07992 297 aaPredicted RBP15.28■□□□□ 0.04
NPAS3-202ENST00000356141 CEACAM1P13688 526 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 ZNF250P15622 560 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 FAM3AP98173 230 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 ZNF529Q6P280 563 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 OR56B2PQ8NGI1 322 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 PCNPQ8WW12 178 aaKnown RBP15.28■□□□□ 0.04
NPAS3-202ENST00000356141 FBXW5Q969U6 566 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 GON7Q9BXV9 100 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 CHST5Q9GZS9 411 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 MGAT4CQ9UBM8 478 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 SH3BGRL2Q9UJC5 107 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 STARD10Q9Y365 291 aa15.28■□□□□ 0.04
NPAS3-202ENST00000356141 IL18BPO95998 194 aa15.27■□□□□ 0.04
NPAS3-202ENST00000356141 CSF1P09603 554 aa15.27■□□□□ 0.04
NPAS3-202ENST00000356141 SELEP16581 610 aa15.27■□□□□ 0.04
NPAS3-202ENST00000356141 DUSP1P28562 367 aa15.27■□□□□ 0.04
NPAS3-202ENST00000356141 ERVS71-1P61550 626 aa15.27■□□□□ 0.04
NPAS3-202ENST00000356141 CXADRP78310 365 aa15.27■□□□□ 0.04
NPAS3-202ENST00000356141 ECH1Q13011 328 aa15.27■□□□□ 0.04
NPAS3-202ENST00000356141 MAB21L1Q13394 359 aa15.27■□□□□ 0.04
NPAS3-202ENST00000356141 PARPBPQ9NWS1 579 aa15.27■□□□□ 0.04
NPAS3-202ENST00000356141 V9GYS6 101 aa15.27■□□□□ 0.04
NPAS3-202ENST00000356141 TMEM14DPA8MWL7 114 aa15.27■□□□□ 0.03
NPAS3-202ENST00000356141 NDUFA2O43678 99 aa15.27■□□□□ 0.03
NPAS3-202ENST00000356141 NRASP01111 189 aa15.27■□□□□ 0.03
NPAS3-202ENST00000356141 CCL1P22362 96 aa15.27■□□□□ 0.03
NPAS3-202ENST00000356141 RIPPLY1Q0D2K3 151 aa15.27■□□□□ 0.03
NPAS3-202ENST00000356141 ARHGAP21Q5T5U3 1957 aa15.27■□□□□ 0.03
NPAS3-202ENST00000356141 A0A0U1RQV5 110 aa15.26■□□□□ 0.03
NPAS3-202ENST00000356141 EIF2S3P41091 472 aaKnown RBP15.26■□□□□ 0.03
NPAS3-202ENST00000356141 IDH3GP51553 393 aaPredicted RBP15.26■□□□□ 0.03
NPAS3-202ENST00000356141 RHOUQ7L0Q8 258 aa15.26■□□□□ 0.03
NPAS3-202ENST00000356141 CALHM1Q8IU99 346 aa15.26■□□□□ 0.03
NPAS3-202ENST00000356141 OR52H1Q8NGJ2 320 aa15.26■□□□□ 0.03
NPAS3-202ENST00000356141 BORCS8Q96FH0 119 aa15.26■□□□□ 0.03
NPAS3-202ENST00000356141 ZNF71Q9NQZ8 489 aaPredicted RBP15.26■□□□□ 0.03
NPAS3-202ENST00000356141 NDUFB6O95139 128 aa15.26■□□□□ 0.03
NPAS3-202ENST00000356141 BTG1P62324 171 aa15.26■□□□□ 0.03
NPAS3-202ENST00000356141 GK2Q14410 553 aaPredicted RBP15.26■□□□□ 0.03
NPAS3-202ENST00000356141 ZGRF1Q86YA3 2104 aa15.26■□□□□ 0.03
NPAS3-202ENST00000356141 FZR1Q9UM11 496 aa15.26■□□□□ 0.03
NPAS3-202ENST00000356141 IGKV3D-15A0A087WSY6 115 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 CCSO14618 274 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 TPOP07202 933 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 CTSSP25774 331 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 RIPPLY2Q5TAB7 128 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 HACD4Q5VWC8 232 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 MDP1Q86V88 176 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 HS3ST6Q96QI5 342 aa15.25■□□□□ 0.03
NPAS3-202ENST00000356141 IL36RNQ9UBH0 155 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms