RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 DBHP09172 617 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 CFPP27918 469 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 MTCP1P56278 107 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 PIGPP57054 158 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 QRFPP83859 136 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 ERGIC1Q969X5 290 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 FAM212BQ9NTI7 297 aaPredicted RBP11.76□□□□□ -0.53
NCDN-201ENST00000356090 PADI1Q9ULC6 663 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 RCL1Q9Y2P8 373 aaKnown RBP11.76□□□□□ -0.53
NCDN-201ENST00000356090 IGKV3D-11A0A0A0MRZ8 115 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 BORCS7-ASMTA0A0B4J1R7 106 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 A0A1W2PPE2 198 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 C7orf77A4D0Y5 90 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 TLX3O43711 291 aaPredicted RBP11.76□□□□□ -0.53
NCDN-201ENST00000356090 CST4P01036 141 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 ZNF708P17019 499 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 RSU1Q15404 277 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 THEM4Q5T1C6 240 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 NCMAPQ5T1S8 102 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 TMEM182Q6ZP80 229 aaPredicted RBP11.76□□□□□ -0.53
NCDN-201ENST00000356090 PLXDC1Q8IUK5 500 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 OR2AE1Q8NHA4 323 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 CNTNAP3Q9BZ76 1288 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 ALKBH4Q9NXW9 302 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 SRPK3Q9UPE1 567 aa11.76□□□□□ -0.53
NCDN-201ENST00000356090 ANKUB1A6NFN9 424 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 DUX1O43812 170 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 OR2J2O76002 312 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 JTBO76095 146 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 OR5H8P0DN80 308 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 RPS10P46783 165 aaKnown RBP11.75□□□□□ -0.53
NCDN-201ENST00000356090 GUK1Q16774 197 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 SPIN3Q5JUX0 258 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 P4HA3Q7Z4N8 544 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 POC1AQ8NBT0 407 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 NOXO1Q8NFA2 376 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 ST8SIA1Q92185 356 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 SAT2Q96F10 170 aaPredicted RBP11.75□□□□□ -0.53
NCDN-201ENST00000356090 AQP10Q96PS8 301 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 PECRQ9BY49 303 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 TMEM100Q9NV29 134 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 NCOA6Q14686 2063 aaPredicted RBP11.75□□□□□ -0.53
NCDN-201ENST00000356090 SPTBN5Q9NRC6 3674 aaKnown RBP11.75□□□□□ -0.53
NCDN-201ENST00000356090 A0A1W2PPE3 182 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 DHRS7CA6NNS2 312 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 GALNSP34059 522 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 DVL1P1P54792 670 aaPredicted RBP11.75□□□□□ -0.53
NCDN-201ENST00000356090 VAX1Q5SQQ9 334 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 AADACL3Q5VUY0 350 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 C5orf46Q6UWT4 87 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 FBXW12Q6X9E4 464 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 DOK3Q7L591 496 aa11.75□□□□□ -0.53
NCDN-201ENST00000356090 BSCL2Q96G97 398 aaPredicted RBP11.75□□□□□ -0.53
NCDN-201ENST00000356090 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 IGKV1-9A0A0C4DH69 117 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 LILRA5A6NI73 299 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 NUDT19A8MXV4 375 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 ZNF814B7Z6K7 855 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 IFNA4P05014 189 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 JMJD7P0C870 316 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 PNLIPP16233 465 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 HNRNPKP61978 463 aaKnown RBP eCLIP11.74□□□□□ -0.53
NCDN-201ENST00000356090 HABP2Q14520 560 aaPredicted RBP11.74□□□□□ -0.53
NCDN-201ENST00000356090 PLXDC2Q6UX71 529 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 CDCA3Q99618 268 aaPredicted RBP11.74□□□□□ -0.53
NCDN-201ENST00000356090 CLEC1BQ9P126 229 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 MMP24Q9Y5R2 645 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 MFNGO00587 321 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 RGS19P49795 217 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 C21orf62-AS1Q17RA5 79 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 HIST1H2BAQ96A08 127 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 SGK3Q96BR1 496 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 GHRLQ9UBU3 117 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 KPTNQ9Y664 436 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 COLCA2A8K830 154 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 GPR37O15354 613 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 OR5AC1P0C628 307 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 NME1P15531 152 aaKnown RBP11.74□□□□□ -0.53
NCDN-201ENST00000356090 CCR5P51681 352 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 RAET1LQ5VY80 246 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 ZNF529Q6P280 563 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 MISPQ8IVT2 679 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 SH3BGRL3Q9H299 93 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 PARPBPQ9NWS1 579 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 DCAF16Q9NXF7 216 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 LUZP4Q9P127 313 aa11.74□□□□□ -0.53
NCDN-201ENST00000356090 MCTS1Q9ULC4 181 aaKnown RBP11.74□□□□□ -0.53
NCDN-201ENST00000356090 EFNA2O43921 213 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 CD37P11049 281 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 FAM189A2Q15884 450 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 PDZD11Q5EBL8 140 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 COL13A1Q5TAT6 717 aaPredicted RBP11.73□□□□□ -0.53
NCDN-201ENST00000356090 LYZL2Q7Z4W2 148 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 NUP210LQ5VU65 1888 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 E9PLN8 166 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 TAAR5O14804 337 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 ZNF728P0DKX0 622 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 CSNK1A1P48729 337 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 SULT1A2P50226 295 aa11.73□□□□□ -0.53
NCDN-201ENST00000356090 PNLIPRP3Q17RR3 467 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms