RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 JUNBP17275 347 aaPredicted RBP13.11□□□□□ -0.31
TRIM13-201ENST00000356017 HAAOP46952 286 aa13.11□□□□□ -0.31
TRIM13-201ENST00000356017 MTCP1P56278 107 aa13.11□□□□□ -0.31
TRIM13-201ENST00000356017 SCCPDHQ8NBX0 429 aa13.11□□□□□ -0.31
TRIM13-201ENST00000356017 ZNF671Q8TAW3 534 aa13.11□□□□□ -0.31
TRIM13-201ENST00000356017 NPRL2Q8WTW4 380 aa13.11□□□□□ -0.31
TRIM13-201ENST00000356017 RAB1CQ92928 201 aa13.11□□□□□ -0.31
TRIM13-201ENST00000356017 MRPS26Q9BYN8 205 aaKnown RBP13.11□□□□□ -0.31
TRIM13-201ENST00000356017 NOX4Q9NPH5 578 aa13.11□□□□□ -0.31
TRIM13-201ENST00000356017 POLDIP2Q9Y2S7 368 aa13.11□□□□□ -0.31
TRIM13-201ENST00000356017 ARID1AO14497 2285 aa13.11□□□□□ -0.31
TRIM13-201ENST00000356017 A0A1W2PPK0 400 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 CYSRT1A8MQ03 144 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 TMEM178BH3BS89 294 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 PPIHO43447 177 aaKnown RBP13.1□□□□□ -0.31
TRIM13-201ENST00000356017 ARL6IP5O75915 188 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 HCKP08631 526 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 SLC25A16P16260 332 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 PMELP40967 661 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 GPR6P46095 362 aaPredicted RBP13.1□□□□□ -0.31
TRIM13-201ENST00000356017 GP2P55259 537 aaKnown RBP13.1□□□□□ -0.31
TRIM13-201ENST00000356017 HAGHLQ6PII5 290 aaPredicted RBP13.1□□□□□ -0.31
TRIM13-201ENST00000356017 CD200R1LQ6Q8B3 271 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 KRTAP1-3Q8IUG1 177 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 C11orf53Q8IXP5 236 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 OR10Z1Q8NGY1 313 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 RPL3LQ92901 407 aaKnown RBP13.1□□□□□ -0.31
TRIM13-201ENST00000356017 TCF7L1Q9HCS4 588 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 CSMD1Q96PZ7 3565 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 SETXQ7Z333 2677 aaKnown RBP13.1□□□□□ -0.31
TRIM13-201ENST00000356017 TRDV1A0A1B0GX56 115 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 TRIM64BA6NI03 449 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 GABRPO00591 440 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 FSTL3O95633 263 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 ALDOBP05062 364 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 UCHL1P09936 223 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 IGFBP3P17936 291 aaPredicted RBP13.1□□□□□ -0.31
TRIM13-201ENST00000356017 BDKRB2P30411 391 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 FABP5Q01469 135 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 INSL4Q14641 139 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 HSD17B12Q53GQ0 312 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 ASPHD2Q6ICH7 369 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 WDR82Q6UXN9 313 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 ZNF826PQ6ZT77 177 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 TGIF2LYQ8IUE0 185 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 AQP3Q92482 292 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 Q96MF0 132 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 PKIBQ9C010 78 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 SLITRK2Q9H156 845 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 NPTNQ9Y639 398 aa13.1□□□□□ -0.31
TRIM13-201ENST00000356017 MEGF11A6BM72 1044 aa13.09□□□□□ -0.31
TRIM13-201ENST00000356017 VWC2LB2RUY7 222 aa13.09□□□□□ -0.31
TRIM13-201ENST00000356017 J3QT63 122 aa13.09□□□□□ -0.31
TRIM13-201ENST00000356017 PIN1P1O15428 100 aa13.09□□□□□ -0.31
TRIM13-201ENST00000356017 SMIM18P0DKX4 95 aa13.09□□□□□ -0.31
TRIM13-201ENST00000356017 SRMP19623 302 aa13.09□□□□□ -0.31
TRIM13-201ENST00000356017 MPZP25189 248 aa13.09□□□□□ -0.31
TRIM13-201ENST00000356017 NR4A2P43354 598 aa13.09□□□□□ -0.31
TRIM13-201ENST00000356017 IL24Q13007 206 aa13.09□□□□□ -0.31
TRIM13-201ENST00000356017 KISS1Q15726 138 aa13.09□□□□□ -0.31
TRIM13-201ENST00000356017 TMEM91Q6ZNR0 172 aa13.09□□□□□ -0.31
TRIM13-201ENST00000356017 WFDC11Q8NEX6 87 aa13.09□□□□□ -0.31
TRIM13-201ENST00000356017 BPESC1Q9GZL8 116 aa13.09□□□□□ -0.31
TRIM13-201ENST00000356017 IGKV1-27A0A075B6S5 117 aa13.08□□□□□ -0.32
TRIM13-201ENST00000356017 TRAV8-7A0A075B6U6 113 aa13.08□□□□□ -0.32
TRIM13-201ENST00000356017 IGHV4-30-2A0A087WSY4 118 aa13.08□□□□□ -0.32
TRIM13-201ENST00000356017 CYB5AP00167 134 aa13.08□□□□□ -0.32
TRIM13-201ENST00000356017 CYB5R3P00387 301 aaPredicted RBP13.08□□□□□ -0.32
TRIM13-201ENST00000356017 LHBP01229 141 aa13.08□□□□□ -0.32
TRIM13-201ENST00000356017 ACAA1P09110 424 aaPredicted RBP13.08□□□□□ -0.32
TRIM13-201ENST00000356017 CD36P16671 472 aa13.08□□□□□ -0.32
TRIM13-201ENST00000356017 BTG1P62324 171 aa13.08□□□□□ -0.32
TRIM13-201ENST00000356017 TIMM50Q3ZCQ8 353 aa13.08□□□□□ -0.32
TRIM13-201ENST00000356017 ANGPTL5Q86XS5 388 aa13.08□□□□□ -0.32
TRIM13-201ENST00000356017 CALHM1Q8IU99 346 aa13.08□□□□□ -0.32
TRIM13-201ENST00000356017 CDH26Q8IXH8 852 aa13.08□□□□□ -0.32
TRIM13-201ENST00000356017 MKXQ8IYA7 352 aa13.08□□□□□ -0.32
TRIM13-201ENST00000356017 GCSAMQ8N6F7 178 aa13.08□□□□□ -0.32
TRIM13-201ENST00000356017 NKAIN3Q8N8D7 197 aa13.08□□□□□ -0.32
TRIM13-201ENST00000356017 OR51A2Q8NGJ7 313 aa13.08□□□□□ -0.32
TRIM13-201ENST00000356017 LRRC29Q8WV35 223 aa13.08□□□□□ -0.32
TRIM13-201ENST00000356017 ORAI1Q96D31 301 aa13.08□□□□□ -0.32
TRIM13-201ENST00000356017 STUB1Q9UNE7 303 aa13.08□□□□□ -0.32
TRIM13-201ENST00000356017 SSR3Q9UNL2 185 aa13.08□□□□□ -0.32
TRIM13-201ENST00000356017 WIPI2Q9Y4P8 454 aa13.08□□□□□ -0.32
TRIM13-201ENST00000356017 PPIAL4EA0A075B759 164 aa13.07□□□□□ -0.32
TRIM13-201ENST00000356017 SRRM5B3KS81 715 aa13.07□□□□□ -0.32
TRIM13-201ENST00000356017 PPIAL4DF5H284 164 aa13.07□□□□□ -0.32
TRIM13-201ENST00000356017 PPIAL4FP0DN26 164 aa13.07□□□□□ -0.32
TRIM13-201ENST00000356017 FGF9P31371 208 aaPredicted RBP13.07□□□□□ -0.32
TRIM13-201ENST00000356017 ZNF93P35789 620 aaPredicted RBP13.07□□□□□ -0.32
TRIM13-201ENST00000356017 FAM27D1Q5T7N8 215 aa13.07□□□□□ -0.32
TRIM13-201ENST00000356017 DDI2Q5TDH0 399 aa13.07□□□□□ -0.32
TRIM13-201ENST00000356017 SPNS3Q6ZMD2 512 aa13.07□□□□□ -0.32
TRIM13-201ENST00000356017 MUC20Q8N307 709 aaPredicted RBP13.07□□□□□ -0.32
TRIM13-201ENST00000356017 PNLDC1Q8NA58 520 aaKnown RBP13.07□□□□□ -0.32
TRIM13-201ENST00000356017 GPER1Q99527 375 aa13.07□□□□□ -0.32
TRIM13-201ENST00000356017 SNTG1Q9NSN8 517 aa13.07□□□□□ -0.32
TRIM13-201ENST00000356017 DCAF16Q9NXF7 216 aa13.07□□□□□ -0.32
TRIM13-201ENST00000356017 GSTK1Q9Y2Q3 226 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms