RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 WWTR1Q9GZV5 400 aa6.8□□□□□ -1.32
CCR9-201ENST00000355983 KIR3DX1Q9H7L2 352 aa6.8□□□□□ -1.32
CCR9-201ENST00000355983 ZMAT3Q9HA38 289 aaKnown RBP6.8□□□□□ -1.32
CCR9-201ENST00000355983 ELOVL3Q9HB03 270 aa6.8□□□□□ -1.32
CCR9-201ENST00000355983 SERINC1Q9NRX5 453 aa6.8□□□□□ -1.32
CCR9-201ENST00000355983 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.8□□□□□ -1.32
CCR9-201ENST00000355983 CGGBP1Q9UFW8 167 aaPredicted RBP6.8□□□□□ -1.32
CCR9-201ENST00000355983 CLDN16Q9Y5I7 305 aa6.8□□□□□ -1.32
CCR9-201ENST00000355983 OBSL1O75147 1896 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 NSG1A0A0A6YYJ2 146 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 CRYM-AS1A6NIL9 109 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 C4orf51C9J302 202 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 GRM6O15303 877 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 C1QL1O75973 258 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 CHRNB4P30926 498 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 ALDH3B1P43353 468 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 FOXK1P85037 733 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 IL24Q13007 206 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 UBE2V1Q13404 147 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 TMEM183BQ1AE95 376 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 SLC22A6Q4U2R8 563 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 PLXDC2Q6UX71 529 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 CHST4Q8NCG5 386 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 OR4D6Q8NGJ1 314 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 OR5AR1Q8NGP9 310 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 TSLPQ969D9 159 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 TECTBQ96PL2 329 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 NKX3-1Q99801 234 aaPredicted RBP6.79□□□□□ -1.32
CCR9-201ENST00000355983 MAGT1Q9H0U3 335 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 SH3BGRL3Q9H299 93 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 Q9N2K0 584 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 LYRM2Q9NU23 88 aaPredicted RBP6.79□□□□□ -1.32
CCR9-201ENST00000355983 FOXJ2Q9P0K8 574 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 SERGEFQ9UGK8 458 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 SLC5A6Q9Y289 635 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 LIPGQ9Y5X9 500 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 POLR2AP24928 1970 aaKnown RBP6.79□□□□□ -1.32
CCR9-201ENST00000355983 PQBP1O60828 265 aaKnown RBP6.79□□□□□ -1.32
CCR9-201ENST00000355983 SCGB1D1O95968 90 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 ESDP10768 282 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 HIST1H1DP16402 221 aaKnown RBP6.79□□□□□ -1.32
CCR9-201ENST00000355983 PSMB5P28074 263 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 CD70P32970 193 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 PTGER1P34995 402 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 GJA4P35212 333 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 PTGER4P35408 488 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 BCL6P41182 706 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 ELLP55199 621 aaPredicted RBP6.79□□□□□ -1.32
CCR9-201ENST00000355983 PAFAH1B2P68402 229 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 EIF3IQ13347 325 aaKnown RBP6.79□□□□□ -1.32
CCR9-201ENST00000355983 ITPRIPL2Q3MIP1 535 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 RTL6Q6ICC9 239 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 SLC18B1Q6NT16 456 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 RSPO2Q6UXX9 243 aaPredicted RBP6.79□□□□□ -1.32
CCR9-201ENST00000355983 DPY19L4Q7Z388 723 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 ZNF547Q8IVP9 402 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 H1FOOQ8IZA3 346 aaPredicted RBP6.79□□□□□ -1.32
CCR9-201ENST00000355983 OR2G3Q8NGZ4 309 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 OR14C36Q8NHC7 312 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 RAB11FIP5Q9BXF6 653 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 C11orf1Q9H5F2 150 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 CNTD2Q9H8S5 307 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 B3GAT1Q9P2W7 334 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 AK3Q9UIJ7 227 aa6.79□□□□□ -1.32
CCR9-201ENST00000355983 LSM5Q9Y4Y9 91 aaKnown RBP6.79□□□□□ -1.32
CCR9-201ENST00000355983 A0A0G2JN53 185 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 NKX2-2O95096 273 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 TIMP1P01033 207 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 ASGR1P07306 291 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 CTSHP09668 335 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 ZNF888P0CJ79 500 aaPredicted RBP6.78□□□□□ -1.32
CCR9-201ENST00000355983 VSIG8P0DPA2 414 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 APOBEC3AP31941 199 aaPredicted RBP6.78□□□□□ -1.32
CCR9-201ENST00000355983 SFTPDP35247 375 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 GRK6P43250 576 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 LBX1P52954 281 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 RAB38P57729 211 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 VAMP2P63027 116 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 ZNF141Q15928 474 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 C1QL3Q5VWW1 255 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 ZNF66Q6ZN08 573 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 NPAS4Q8IUM7 802 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 ZNF440Q8IYI8 595 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 OR51G1Q8NGK1 321 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 GPR119Q8TDV5 335 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 SCARF2Q96GP6 870 aaPredicted RBP6.78□□□□□ -1.32
CCR9-201ENST00000355983 ALKBH3Q96Q83 286 aaPredicted RBP6.78□□□□□ -1.32
CCR9-201ENST00000355983 TP53RKQ96S44 253 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 APOBEC3BQ9UH17 382 aaKnown RBP6.78□□□□□ -1.32
CCR9-201ENST00000355983 LSM7Q9UK45 103 aaKnown RBP6.78□□□□□ -1.32
CCR9-201ENST00000355983 HSF4Q9ULV5 492 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 FUT9Q9Y231 359 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 R4GMQ9 66 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 FANCMQ8IYD8 2048 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 IGKV1-8A0A0C4DH67 115 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 SEMA4FO95754 770 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 GNB3P16520 340 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 ATP6V0CP27449 155 aa6.78□□□□□ -1.32
CCR9-201ENST00000355983 SRP14P37108 136 aaKnown RBP6.78□□□□□ -1.32
CCR9-201ENST00000355983 FLT3LGP49771 235 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms