RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 NOX4Q9NPH5 578 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 OBP2BQ9NPH6 170 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 SPATA2Q9UM82 520 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 SLC22A13Q9Y226 551 aa5.98□□□□□ -1.45
VPS13A-201ENST00000355766 A0A096LNT2 108 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 A0A0A6YYH2 397 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 A0A1B0GVI7 797 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 UBE2QL1A1L167 161 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 A6NJ64 397 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 ANXA2P2A6NMY6 339 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 PIN1P1O15428 100 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 SGCEO43556 437 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 SYNGR3O43761 229 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 UPK1BO75841 260 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 KRT33AO76009 404 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 SCGNO76038 276 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 RPP14O95059 124 aaKnown RBP5.97□□□□□ -1.45
VPS13A-201ENST00000355766 UBL3O95164 117 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 MPZL1O95297 269 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 GPANK1O95872 356 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 PTTG1O95997 202 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 PNPP00491 289 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 HLA-DQB1P01920 261 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 TTRP02766 147 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 SERPINA5P05154 406 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 ANXA2P07355 339 aaKnown RBP5.97□□□□□ -1.45
VPS13A-201ENST00000355766 MMP7P09237 267 aaPredicted RBP5.97□□□□□ -1.45
VPS13A-201ENST00000355766 ACSM4P0C7M7 580 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 IGFBP3P17936 291 aaPredicted RBP5.97□□□□□ -1.45
VPS13A-201ENST00000355766 MPGP29372 298 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 TNFSF8P32971 234 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 PSMB10P40306 273 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 EVX1P49640 407 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 TPTEP56180 551 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 DEFA1P59665 94 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 DEFA3P59666 94 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 MFGE8Q08431 387 aaPredicted RBP5.97□□□□□ -1.45
VPS13A-201ENST00000355766 CEACAM16Q2WEN9 425 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 CEP78Q5JTW2 689 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 UBE2NLQ5JXB2 153 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 PHYHD1Q5SRE7 291 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 FBXW9Q5XUX1 488 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 GLT8D1Q68CQ7 371 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 ANKRD16Q6P6B7 361 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 PLXDC2Q6UX71 529 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 STAC2Q6ZMT1 411 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 UTS2BQ765I0 119 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 KRT74Q7RTS7 529 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 PRSS45Q7RTY3 260 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 ZNF575Q86XF7 245 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 LINC00346Q8IVM7 164 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 ZNF100Q8IYN0 542 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 C17orf78Q8N4C9 275 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 CHPT1Q8WUD6 406 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 TSEN15Q8WW01 171 aaKnown RBP5.97□□□□□ -1.45
VPS13A-201ENST00000355766 RAB40AQ8WXH6 277 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 PP6455Q8WZ26 134 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 ZC3HAV1LQ96H79 300 aaKnown RBP5.97□□□□□ -1.45
VPS13A-201ENST00000355766 KCNS3Q9BQ31 491 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 SOSTQ9BQB4 213 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 NUDT16L1Q9BRJ7 211 aaKnown RBP5.97□□□□□ -1.45
VPS13A-201ENST00000355766 TTTY10Q9BZA0 68 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 PBOV1Q9GZY1 135 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 SHARPINQ9H0F6 387 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 ABCG5Q9H222 651 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 TPK1Q9H3S4 243 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 NEK6Q9HC98 313 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 EMC7Q9NPA0 242 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 CYSLTR2Q9NS75 346 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 ZNF275Q9NSD4 429 aaPredicted RBP5.97□□□□□ -1.45
VPS13A-201ENST00000355766 DMRT1Q9Y5R6 373 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 V9GY05 133 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 V9GYH0 126 aa5.97□□□□□ -1.45
VPS13A-201ENST00000355766 C16orf97H3BN30 126 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 M0R135 149 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 SLC17A2O00624 439 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 CTDSP2O14595 271 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 CTDSPLO15194 276 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 RER1O15258 196 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 MAGEB4O15481 346 aaPredicted RBP5.96□□□□□ -1.46
VPS13A-201ENST00000355766 RGS5O15539 181 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 SYT7O43581 403 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 DOK2O60496 412 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 DHRS3O75911 302 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 PLAUP00749 431 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 ALDOBP05062 364 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 B4GALT1P15291 398 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 SRD5A1P18405 259 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 COX5AP20674 150 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 TUBG1P23258 451 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 CDAP32320 146 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 RPS27P42677 84 aaKnown RBP5.96□□□□□ -1.46
VPS13A-201ENST00000355766 CX3CR1P49238 355 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 ZNF121P58317 390 aaPredicted RBP5.96□□□□□ -1.46
VPS13A-201ENST00000355766 PITPNAQ00169 270 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 SRYQ05066 204 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 MXD1Q05195 221 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 INSL4Q14641 139 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 P2RY6Q15077 328 aa5.96□□□□□ -1.46
VPS13A-201ENST00000355766 SGCAQ16586 387 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms