RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 GLRX2Q9NS18 164 aa10.96□□□□□ -0.66
COLCA1-201ENST00000355430 PRR13Q9NZ81 148 aa10.96□□□□□ -0.66
COLCA1-201ENST00000355430 ZMIZ1Q9ULJ6 1067 aa10.96□□□□□ -0.66
COLCA1-201ENST00000355430 MYLKQ15746 1914 aa10.96□□□□□ -0.66
COLCA1-201ENST00000355430 PLPP3O14495 311 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 EPPINO95925 133 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 COX6B1P14854 86 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 PIGPP57054 158 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 GNB2P62879 340 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 PNLIPRP3Q17RR3 467 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 DCAF12L2Q5VW00 463 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 SHEQ5VZ18 495 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 RPUSD3Q6P087 351 aaKnown RBP10.95□□□□□ -0.66
COLCA1-201ENST00000355430 IL34Q6ZMJ4 242 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 RBMXL1Q96E39 390 aaKnown RBP10.95□□□□□ -0.66
COLCA1-201ENST00000355430 NIPSNAP3BQ9BS92 247 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 ABCD4O14678 606 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 GRPP07492 148 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 OR5H8P0DN80 308 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 FAHP16930 419 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 GLRA1P23415 457 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 FPR2P25090 351 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 SRD5A2P31213 254 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 HAGHQ16775 308 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 ARRDC1Q8N5I2 433 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 OR10G3Q8NGC4 313 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 FRZBQ92765 325 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 SDSLQ96GA7 329 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 GFOD1Q9NXC2 390 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 GNG12Q9UBI6 72 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 E5RGE8 158 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 GPR31O00270 319 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 NKX2-1P43699 371 aaPredicted RBP10.95□□□□□ -0.66
COLCA1-201ENST00000355430 RBP2P50120 134 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 DEFA6Q01524 100 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 TUSC1Q2TAM9 212 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 ARHGEF39Q8N4T4 335 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 C12orf10Q9HB07 376 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 AK3Q9UIJ7 227 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 TRAPPC2LQ9UL33 140 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 NSG2Q9Y328 171 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 TMEM229AB2RXF0 380 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 CCL21O00585 134 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 SFT2D2O95562 160 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 OR3A4PP47883 348 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 EDDM3BP56851 147 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 LSRQ86X29 649 aaPredicted RBP10.95□□□□□ -0.66
COLCA1-201ENST00000355430 ZFP62Q8NB50 900 aaPredicted RBP10.95□□□□□ -0.66
COLCA1-201ENST00000355430 SGK3Q96BR1 496 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 FBXO17Q96EF6 278 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 UQCC2Q9BRT2 126 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 ZNF275Q9NSD4 429 aaPredicted RBP10.95□□□□□ -0.66
COLCA1-201ENST00000355430 RYDENQ9NUL5 291 aaKnown RBP10.95□□□□□ -0.66
COLCA1-201ENST00000355430 KCNE5Q9UJ90 142 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 MYOFQ9NZM1 2061 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 LNP1A1A4G5 178 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 TSTD3H0UI37 97 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 HIST1H1DP16402 221 aaKnown RBP10.95□□□□□ -0.66
COLCA1-201ENST00000355430 NDUFB7P17568 137 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 TMEM108Q6UXF1 575 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 HIST2H3AQ71DI3 136 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 SCCPDHQ8NBX0 429 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 LFNGQ8NES3 379 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 SEH1LQ96EE3 360 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 PLEKHA2Q9HB19 425 aa10.95□□□□□ -0.66
COLCA1-201ENST00000355430 A0A096LPE4 126 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 A0A1W2PPZ6 126 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 RAB19A4D1S5 217 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 THY1P04216 161 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 S100A7P31151 101 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 PTGER4P35408 488 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 RAB32Q13637 225 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 C16orf47Q6ZP98 133 aaPredicted RBP10.94□□□□□ -0.66
COLCA1-201ENST00000355430 NUBPLQ8TB37 319 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 SLC25A38Q96DW6 304 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 PHYHIPLQ96FC7 376 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 SSX3Q99909 188 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 ZFP92A6NM28 416 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 H7C1Q1 480 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 MASP2O00187 686 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 DICER1Q9UPY3 1922 aaKnown RBP10.94□□□□□ -0.66
COLCA1-201ENST00000355430 SPRY1O43609 319 aaPredicted RBP10.94□□□□□ -0.66
COLCA1-201ENST00000355430 DUS4LO95620 317 aaKnown RBP10.94□□□□□ -0.66
COLCA1-201ENST00000355430 H2AFB1P0C5Y9 115 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 CT45A8P0DMV1 189 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 CT45A9P0DMV2 189 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 SRP14P37108 136 aaKnown RBP10.94□□□□□ -0.66
COLCA1-201ENST00000355430 PJVKQ0ZLH3 352 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 SKP2Q13309 424 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 INPP5JQ15735 1006 aaPredicted RBP10.94□□□□□ -0.66
COLCA1-201ENST00000355430 CT45A2Q5DJT8 189 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 LAMTOR1Q6IAA8 161 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 OR51F2Q8NH61 342 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 CEP290O15078 2479 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 SSSCA1O60232 199 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 TUSC2O75896 110 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 NGFRP08138 427 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 CD37P11049 281 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 SCGB2A2Q13296 93 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 TMEM268Q5VZI3 342 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms