RNA–Protein interactions for RNA: ENST00000351842.8

USP4-202, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 1 (best) BASIC

Gene USP4, Length 3,222 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-202ENST00000351842 CCDC58Q4VC31 144 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 BRICD5Q6PL45 260 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 SEZ6L2Q6UXD5 910 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 MUC15Q8N387 334 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 OR5D14Q8NGL3 314 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 BORCS8Q96FH0 119 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 BCL2L14Q9BZR8 327 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 ING4Q9UNL4 249 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 NAV3Q8IVL0 2385 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 JMJD1CQ15652 2540 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 ARPC4-TTLL3A0A0A6YYG9 625 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 CDIPTO14735 213 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 XRCC2O43543 280 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 ICMTO60725 284 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 RAB3AP20336 220 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 SERPINA2P20848 420 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 ACHEP22303 614 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 ADIPOQQ15848 244 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 CCDC190Q86UF4 302 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 OR14K1Q8NGZ2 314 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 CCL17Q92583 94 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 MARS2Q96GW9 593 aaKnown RBP7.88□□□□□ -1.15
USP4-202ENST00000351842 PURGQ9UJV8 347 aaKnown RBP7.88□□□□□ -1.15
USP4-202ENST00000351842 MAST4O15021 2626 aa7.88□□□□□ -1.15
USP4-202ENST00000351842 hCG_38984A0A1B0GV85 526 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 SOD3P08294 240 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 ADRA2CP18825 462 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 OR3A4PP47883 348 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 MMP15P51511 669 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 ASPHD2Q6ICH7 369 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 GDPGP1Q6ZNW5 385 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 SLC25A26Q70HW3 274 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 NR2C2APQ86WQ0 139 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 LINC00469Q8N7U9 141 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 MCFD2Q8NI22 146 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 S100A13Q99584 98 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 C12orf4Q9NQ89 552 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 SHISA9B4DS77 424 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 ARL6IP5O75915 188 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 RAB3BP20337 219 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 AZGP1P25311 298 aaKnown RBP7.87□□□□□ -1.15
USP4-202ENST00000351842 THBS2P35442 1172 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 TLE4Q04727 773 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 NCMAPQ5T1S8 102 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 AWAT2Q6E213 333 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 DMRTC2Q8IXT2 367 aaPredicted RBP7.87□□□□□ -1.15
USP4-202ENST00000351842 OR51D1Q8NGF3 324 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 TNFAIP8L1Q8WVP5 186 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 REPIN1Q9BWE0 567 aaKnown RBP7.87□□□□□ -1.15
USP4-202ENST00000351842 OR14J1Q9UGF5 321 aa7.87□□□□□ -1.15
USP4-202ENST00000351842 IGKV1-9A0A0C4DH69 117 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 M0R233 179 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 ZNF93P35789 620 aaPredicted RBP7.86□□□□□ -1.15
USP4-202ENST00000351842 ZNF81P51508 661 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 KRTAP10-9P60411 292 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 UNQ6126/PRO20091Q6UXV3 157 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 FTMTQ8N4E7 242 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 OR1M1Q8NGA1 313 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 SLAMF9Q96A28 289 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 MOB1AQ9H8S9 216 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 TMEM100Q9NV29 134 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 PLEKHB1Q9UF11 243 aaPredicted RBP7.86□□□□□ -1.15
USP4-202ENST00000351842 KCNN3Q9UGI6 736 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 PEX16Q9Y5Y5 336 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 ZNF816-ZNF321PA0A0X1KG74 233 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 RHBDL1O75783 438 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 PTHLHP12272 177 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 GLRXP35754 106 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 CCR9P51686 369 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 PLA2G7Q13093 441 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 Q6ZR03 302 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 C1QL2Q7Z5L3 287 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 MOGAT3Q86VF5 341 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 CALHM1Q8IU99 346 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 ZDHHC23Q8IYP9 409 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 GCDHQ92947 438 aaPredicted RBP7.86□□□□□ -1.15
USP4-202ENST00000351842 FBXW5Q969U6 566 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 WDFY2Q96P53 400 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 OR2V2Q96R30 315 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 SDHCQ99643 169 aaPredicted RBP7.86□□□□□ -1.15
USP4-202ENST00000351842 CACNG6Q9BXT2 260 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 WDR13Q9H1Z4 485 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 ZCCHC4Q9H5U6 513 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 IL36RNQ9UBH0 155 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 SLC7A11Q9UPY5 501 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 PLEKHA6Q9Y2H5 1048 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 IGHV3OR15-7A0A075B7D8 119 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 TRDV1A0A1B0GX56 115 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 CTDSP2O14595 271 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 HOXB1P14653 301 aaPredicted RBP7.86□□□□□ -1.15
USP4-202ENST00000351842 MAPK3P27361 379 aaPredicted RBP7.86□□□□□ -1.15
USP4-202ENST00000351842 BDKRB2P30411 391 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 DPPA2Q7Z7J5 298 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 FBXL14Q8N1E6 418 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 ITLN1Q8WWA0 313 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 CCDC32Q9BV29 185 aa7.86□□□□□ -1.15
USP4-202ENST00000351842 FAM25AB3EWG3 89 aa7.85□□□□□ -1.15
USP4-202ENST00000351842 FAM25CB3EWG5 89 aa7.85□□□□□ -1.15
USP4-202ENST00000351842 FAM25GB3EWG6 89 aa7.85□□□□□ -1.15
USP4-202ENST00000351842 WNT9BO14905 357 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms