RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 PLA1AQ53H76 456 aa14.27□□□□□ -0.13
PTPN11-201ENST00000351677 MRGPREQ86SM8 312 aa14.27□□□□□ -0.13
PTPN11-201ENST00000351677 NPEPL1Q8NDH3 523 aa14.27□□□□□ -0.13
PTPN11-201ENST00000351677 MRPS24Q96EL2 167 aaKnown RBP14.27□□□□□ -0.13
PTPN11-201ENST00000351677 GPR31O00270 319 aa14.27□□□□□ -0.13
PTPN11-201ENST00000351677 EPHA8P29322 1005 aaPredicted RBP14.27□□□□□ -0.13
PTPN11-201ENST00000351677 SMIM15Q7Z3B0 74 aa14.27□□□□□ -0.13
PTPN11-201ENST00000351677 OR10D3Q8NH80 312 aa14.27□□□□□ -0.13
PTPN11-201ENST00000351677 S1PR3Q99500 378 aa14.27□□□□□ -0.13
PTPN11-201ENST00000351677 CLEC18AA5D8T8 446 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 CDC14BO60729 498 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 C9orf152Q5JTZ5 239 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 CLEC18CQ8NCF0 446 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 TECTBQ96PL2 329 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 GALNSP34059 522 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 PCM1Q15154 2024 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 RGS7BPQ6MZT1 257 aaPredicted RBP14.26□□□□□ -0.13
PTPN11-201ENST00000351677 DEGS2Q6QHC5 323 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 ATG4DQ86TL0 474 aaPredicted RBP14.26□□□□□ -0.13
PTPN11-201ENST00000351677 CPEB3Q8NE35 698 aaKnown RBP14.26□□□□□ -0.13
PTPN11-201ENST00000351677 OR4D9Q8NGE8 314 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 FRRS1LQ9P0K9 344 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 FZR1Q9UM11 496 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 GPR37O15354 613 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 RPS16P62249 146 aaKnown RBP14.26□□□□□ -0.13
PTPN11-201ENST00000351677 RAC1P63000 192 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 PABPC1L2AQ5JQF8 200 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 ZNF705AQ6ZN79 300 aaPredicted RBP14.26□□□□□ -0.13
PTPN11-201ENST00000351677 GPA33Q99795 319 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 ADAT1Q9BUB4 502 aaKnown RBP14.26□□□□□ -0.13
PTPN11-201ENST00000351677 MIXL1Q9H2W2 232 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 RHOFQ9HBH0 211 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 NIT2Q9NQR4 276 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 DVL1O14640 695 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 SLC25A6P12236 298 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 DVL1P1P54792 670 aaPredicted RBP14.26□□□□□ -0.13
PTPN11-201ENST00000351677 OR8U1Q8NH10 309 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 CLDN23Q96B33 292 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 SPRY3O43610 288 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 ACSM4P0C7M7 580 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 CA6P23280 308 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 TRA2AQ13595 282 aaKnown RBP eCLIP14.26□□□□□ -0.13
PTPN11-201ENST00000351677 SMIM21Q3B7S5 101 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 ACOT6Q3I5F7 207 aaPredicted RBP14.26□□□□□ -0.13
PTPN11-201ENST00000351677 OR10V1Q8NGI7 309 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 V9GYS6 101 aa14.26□□□□□ -0.13
PTPN11-201ENST00000351677 SHANK3Q9BYB0 1731 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 C9orf170A2RU37 121 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 TFF2Q03403 129 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 HLXQ14774 488 aaPredicted RBP14.25□□□□□ -0.13
PTPN11-201ENST00000351677 B3GNTL1Q67FW5 361 aaPredicted RBP14.25□□□□□ -0.13
PTPN11-201ENST00000351677 SFTPA2Q8IWL1 248 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 ASB10Q8WXI3 467 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 AKR1E2Q96JD6 320 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 TUBAL3A6NHL2 446 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 NPIPB8E9PQR5 432 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 TRAF3IP2O43734 574 aaPredicted RBP14.25□□□□□ -0.13
PTPN11-201ENST00000351677 OR5G3P0C626 314 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 SLC37A1P57057 533 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 ZNF766Q5HY98 468 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 C12orf10Q9HB07 376 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 ANKRD20A5PA0PJZ0 165 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 MEOX1P50221 254 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 UBE2G1P62253 170 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 CLLU1Q5K131 121 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 TIMD4Q96H15 378 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 BRWD1Q9NSI6 2320 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 PLXNB2O15031 1838 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 ATAD5Q96QE3 1844 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 MPLP40238 635 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 TMEM52Q8NDY8 209 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 C10orf90Q96M02 699 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 TAAR6Q96RI8 345 aa14.25□□□□□ -0.13
PTPN11-201ENST00000351677 OGG1O15527 345 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 GALR2O43603 387 aaPredicted RBP14.24□□□□□ -0.13
PTPN11-201ENST00000351677 IGHA1P01876 353 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 GNG3P63215 75 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 C4orf17Q53FE4 359 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 RHBDD2Q6NTF9 364 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 UBAC2Q8NBM4 344 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 SOX7Q9BT81 388 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 CHST6Q9GZX3 395 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 CENPVL1A0A0U1RR11 272 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 PDGFBP01127 241 aaPredicted RBP14.24□□□□□ -0.13
PTPN11-201ENST00000351677 FGF7P21781 194 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 OR10AC1Q8NH08 325 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 MITD1Q8WV92 249 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 PRRX2Q99811 253 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 UBE2L5PA0A1B0GUS4 154 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 OR7C2O60412 319 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 TSEN54Q7Z6J9 526 aaKnown RBP14.24□□□□□ -0.13
PTPN11-201ENST00000351677 MAP6Q96JE9 813 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 OCIAD1Q9NX40 245 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 SFT2D2O95562 160 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 KRASP01116 189 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 PRDX4Q13162 271 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 OR2Z1Q8NG97 314 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 SMIM7Q9BQ49 75 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 COMMD5Q9GZQ3 224 aa14.24□□□□□ -0.13
PTPN11-201ENST00000351677 MIA3Q5JRA6 1907 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms