RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 PBDC1Q9BVG4 233 aa16.45■□□□□ 0.22
SCARF1-202ENST00000348987 OR11A1Q9GZK7 315 aa16.45■□□□□ 0.22
SCARF1-202ENST00000348987 GPR27Q9NS67 375 aa16.45■□□□□ 0.22
SCARF1-202ENST00000348987 ZNF587BE7ETH6 402 aa16.45■□□□□ 0.22
SCARF1-202ENST00000348987 MPIG6BO95866 241 aa16.45■□□□□ 0.22
SCARF1-202ENST00000348987 SERPINA2P20848 420 aa16.45■□□□□ 0.22
SCARF1-202ENST00000348987 CEBPGP53567 150 aa16.45■□□□□ 0.22
SCARF1-202ENST00000348987 FOXL2P58012 376 aa16.45■□□□□ 0.22
SCARF1-202ENST00000348987 DCXRQ7Z4W1 244 aa16.45■□□□□ 0.22
SCARF1-202ENST00000348987 SCGB3A2Q96PL1 93 aa16.45■□□□□ 0.22
SCARF1-202ENST00000348987 CCNL2Q96S94 520 aaPredicted RBP16.45■□□□□ 0.22
SCARF1-202ENST00000348987 BANF2Q9H503 90 aa16.45■□□□□ 0.22
SCARF1-202ENST00000348987 WFDC1Q9HC57 220 aa16.45■□□□□ 0.22
SCARF1-202ENST00000348987 CA14Q9ULX7 337 aa16.45■□□□□ 0.22
SCARF1-202ENST00000348987 CABIN1Q9Y6J0 2220 aa16.44■□□□□ 0.22
SCARF1-202ENST00000348987 SEC11BP0C7V7 166 aa16.44■□□□□ 0.22
SCARF1-202ENST00000348987 HSD11B1P28845 292 aa16.44■□□□□ 0.22
SCARF1-202ENST00000348987 OR3A2P47893 321 aa16.44■□□□□ 0.22
SCARF1-202ENST00000348987 UBE2V2Q15819 145 aa16.44■□□□□ 0.22
SCARF1-202ENST00000348987 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.44■□□□□ 0.22
SCARF1-202ENST00000348987 TGIF2LXQ8IUE1 241 aa16.44■□□□□ 0.22
SCARF1-202ENST00000348987 TMEM156Q8N614 296 aa16.44■□□□□ 0.22
SCARF1-202ENST00000348987 HS3ST3B1Q9Y662 390 aa16.44■□□□□ 0.22
SCARF1-202ENST00000348987 TRIOBPQ9H2D6 2365 aa16.44■□□□□ 0.22
SCARF1-202ENST00000348987 TMEM14DPA8MWL7 114 aa16.44■□□□□ 0.22
SCARF1-202ENST00000348987 TRGC2P03986 189 aa16.44■□□□□ 0.22
SCARF1-202ENST00000348987 AMY2BP19961 511 aa16.44■□□□□ 0.22
SCARF1-202ENST00000348987 CASP6P55212 293 aa16.44■□□□□ 0.22
SCARF1-202ENST00000348987 TMEM50BP56557 158 aa16.44■□□□□ 0.22
SCARF1-202ENST00000348987 ERVFRD-1P60508 538 aa16.44■□□□□ 0.22
SCARF1-202ENST00000348987 RPL27P61353 136 aaKnown RBP16.44■□□□□ 0.22
SCARF1-202ENST00000348987 CHAF1BQ13112 559 aa16.44■□□□□ 0.22
SCARF1-202ENST00000348987 LHFPL1Q86WI0 220 aa16.44■□□□□ 0.22
SCARF1-202ENST00000348987 RBM14Q96PK6 669 aaKnown RBP16.44■□□□□ 0.22
SCARF1-202ENST00000348987 FOXQ1Q9C009 403 aa16.44■□□□□ 0.22
SCARF1-202ENST00000348987 CENPMQ9NSP4 180 aa16.44■□□□□ 0.22
SCARF1-202ENST00000348987 TGIF2-C20orf24A0A0A6YYL0 155 aa16.43■□□□□ 0.22
SCARF1-202ENST00000348987 A0A1W2PP11 408 aa16.43■□□□□ 0.22
SCARF1-202ENST00000348987 OR5H15A6NDH6 313 aa16.43■□□□□ 0.22
SCARF1-202ENST00000348987 OR5H1A6NKK0 313 aa16.43■□□□□ 0.22
SCARF1-202ENST00000348987 SCGNO76038 276 aa16.43■□□□□ 0.22
SCARF1-202ENST00000348987 NUDT14O95848 222 aa16.43■□□□□ 0.22
SCARF1-202ENST00000348987 HIST1H1DP16402 221 aaKnown RBP16.43■□□□□ 0.22
SCARF1-202ENST00000348987 PTGER4P35408 488 aa16.43■□□□□ 0.22
SCARF1-202ENST00000348987 TAGLN2P37802 199 aaKnown RBP16.43■□□□□ 0.22
SCARF1-202ENST00000348987 RAB39BQ96DA2 213 aa16.43■□□□□ 0.22
SCARF1-202ENST00000348987 NELFAQ9H3P2 528 aa16.43■□□□□ 0.22
SCARF1-202ENST00000348987 ZNF576Q9H609 170 aa16.43■□□□□ 0.22
SCARF1-202ENST00000348987 OSGIN2Q9Y236 505 aa16.43■□□□□ 0.22
SCARF1-202ENST00000348987 FIGNL2A6NMB9 653 aa16.43■□□□□ 0.22
SCARF1-202ENST00000348987 CYB5BO43169 146 aa16.43■□□□□ 0.22
SCARF1-202ENST00000348987 SLC2A1P11166 492 aa16.43■□□□□ 0.22
SCARF1-202ENST00000348987 BCKDHBP21953 392 aa16.43■□□□□ 0.22
SCARF1-202ENST00000348987 ZNF93P35789 620 aaPredicted RBP16.43■□□□□ 0.22
SCARF1-202ENST00000348987 NKX6-1P78426 367 aaPredicted RBP16.43■□□□□ 0.22
SCARF1-202ENST00000348987 HSD17B11Q8NBQ5 300 aa16.43■□□□□ 0.22
SCARF1-202ENST00000348987 FNDC9Q8TBE3 224 aa16.43■□□□□ 0.22
SCARF1-202ENST00000348987 CA5BP1Q8WTZ4 195 aa16.43■□□□□ 0.22
SCARF1-202ENST00000348987 ARV1Q9H2C2 271 aa16.43■□□□□ 0.22
SCARF1-202ENST00000348987 C1orf123Q9NWV4 160 aa16.43■□□□□ 0.22
SCARF1-202ENST00000348987 A0A1W2PPC4 97 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 H3BQ15 152 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 IFNA10P01566 189 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 BGLAPP02818 100 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 RBMXP38159 391 aaKnown RBP16.42■□□□□ 0.22
SCARF1-202ENST00000348987 ARFRP1Q13795 201 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 USF2Q15853 346 aaPredicted RBP16.42■□□□□ 0.22
SCARF1-202ENST00000348987 GLIPR1L1Q6UWM5 242 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 ZNF519Q8TB69 540 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 LMX1AQ8TE12 382 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 ADIPOR1Q96A54 375 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 ARHGAP5-AS1Q96IT6 56 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 NEU1Q99519 415 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 C2orf88Q9BSF0 95 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 BCO1Q9HAY6 547 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 EHFQ9NZC4 300 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 WDFY4Q6ZS81 3184 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 TMEM131Q92545 1883 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 RPL36A-HNRNPH2H7BZ11 118 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 HEXBP07686 556 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 GLO1Q04760 184 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 C1orf140Q5VVS0 124 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 FAM213BQ8TBF2 198 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 ANAPC10Q9UM13 185 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 UNC13CQ8NB66 2214 aa16.42■□□□□ 0.22
SCARF1-202ENST00000348987 ZNF724A8MTY0 619 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 TCAPO15273 167 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 DDAH2O95865 285 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 IGKV3-11P04433 115 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 CHRM2P08172 466 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 BLKP51451 505 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 CCR5P51681 352 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 HSD11B2P80365 405 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 OR2T2Q6IF00 324 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 OR10AD1Q8NGE0 317 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 MRPL24Q96A35 216 aaKnown RBP16.41■□□□□ 0.22
SCARF1-202ENST00000348987 B3GALT5Q9Y2C3 310 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 RCL1Q9Y2P8 373 aaKnown RBP16.41■□□□□ 0.22
SCARF1-202ENST00000348987 TMED3Q9Y3Q3 217 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 TNRC18O15417 2968 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms