RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 NTMQ9P121 344 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 CDK5RAP2Q96SN8 1893 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 ECM29Q5VYK3 1845 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 ZNF724A8MTY0 619 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 LY86O95711 162 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 RPL12P30050 165 aaKnown RBP13.74□□□□□ -0.21
PTPRO-202ENST00000348962 ZNF441Q8N8Z8 693 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 DPF1Q92782 380 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 C2orf50Q96LR7 162 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 CCL3P10147 92 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 PSG6Q00889 435 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 OR2M7Q8NG81 312 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 SIRT5Q9NXA8 310 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 TIMM9Q9Y5J7 89 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 LAMA4Q16363 1823 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 DNPH1O43598 174 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 EML2O95834 649 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 PAX6P26367 422 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 SLC37A1P57057 533 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 TMPRSS3P57727 454 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 PLA1AQ53H76 456 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 ACOT7LQ6ZUV0 252 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 BAGE3Q86Y29 109 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 BAGE2Q86Y30 109 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 SKA3Q8IX90 412 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 OR8B3Q8NGG8 313 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 ACY3Q96HD9 319 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 OR8B2Q96RD0 313 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 SAP30LQ9HAJ7 183 aa13.74□□□□□ -0.21
PTPRO-202ENST00000348962 ZNF705GA8MUZ8 300 aaPredicted RBP13.73□□□□□ -0.21
PTPRO-202ENST00000348962 KRASP01116 189 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 OR4E1P0C645 316 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 PATE4P0C8F1 98 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 SULT1A3P0DMM9 295 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 SULT1A4P0DMN0 295 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 CTLA4P16410 223 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 TMUB2Q71RG4 321 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 CYTIPO60759 359 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 CCL2P13500 99 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 PCMT1P22061 227 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 CEACAM6P40199 344 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 LSM6P62312 80 aaKnown RBP13.73□□□□□ -0.21
PTPRO-202ENST00000348962 PXDC1Q5TGL8 231 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 SLC17A5Q9NRA2 495 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 ZNF835Q9Y2P0 537 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 ZDBF2Q9HCK1 2354 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 LIPT2A6NK58 231 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 ZNF785A8K8V0 405 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 SNRPNP63162 240 aaKnown RBP13.73□□□□□ -0.21
PTPRO-202ENST00000348962 LCN15Q6UWW0 184 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 MARC2Q969Z3 335 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 SIRT3Q9NTG7 399 aaPredicted RBP13.73□□□□□ -0.21
PTPRO-202ENST00000348962 CDKN2AP42771 156 aaKnown RBP13.73□□□□□ -0.21
PTPRO-202ENST00000348962 GPNMBQ14956 572 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 C3AR1Q16581 482 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 MSRB3Q8IXL7 192 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 MED30Q96HR3 178 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 TCEAL7Q9BRU2 100 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 IL36GQ9NZH8 169 aa13.73□□□□□ -0.21
PTPRO-202ENST00000348962 CYR61O00622 381 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 LALBAP00709 142 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 TRAPPC2P0DI81 140 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 TRAPPC2BP0DI82 140 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 TAGLN2P37802 199 aaKnown RBP13.72□□□□□ -0.21
PTPRO-202ENST00000348962 RPL35P42766 123 aaKnown RBP13.72□□□□□ -0.21
PTPRO-202ENST00000348962 Q56UQ5 140 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 MOGAT1Q96PD6 335 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 MAGT1Q9H0U3 335 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 MLF1P58340 268 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 C21orf58P58505 322 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 KRTCAP3Q53RY4 240 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 FAM27D1Q5T7N8 215 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 LYG2Q86SG7 212 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 SCARB1Q8WTV0 552 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 OR5V1Q9UGF6 321 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 PDCD6O75340 191 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 TMEM229BQ8NBD8 167 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 SMIM4Q8WVI0 70 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 PSG11Q9UQ72 335 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 ATG2BQ96BY7 2078 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 SNRPGP15A8MWD9 76 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 HMGA2P52926 109 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 RTP5Q14D33 572 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 CD226Q15762 336 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 TMEM128Q5BJH2 165 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 TIPARPQ7Z3E1 657 aaKnown RBP13.72□□□□□ -0.21
PTPRO-202ENST00000348962 UBALD1Q8TB05 177 aa13.72□□□□□ -0.21
PTPRO-202ENST00000348962 ERRFI1Q9UJM3 462 aaPredicted RBP13.72□□□□□ -0.21
PTPRO-202ENST00000348962 OR4A8P0C604 315 aa13.71□□□□□ -0.21
PTPRO-202ENST00000348962 SP9P0CG40 484 aa13.71□□□□□ -0.21
PTPRO-202ENST00000348962 TGM1P22735 817 aa13.71□□□□□ -0.21
PTPRO-202ENST00000348962 OR3A4PP47883 348 aa13.71□□□□□ -0.21
PTPRO-202ENST00000348962 ZFP36L2P47974 494 aaKnown RBP13.71□□□□□ -0.21
PTPRO-202ENST00000348962 ETFRF1Q6IPR1 90 aa13.71□□□□□ -0.21
PTPRO-202ENST00000348962 OR52N4Q8NGI2 321 aa13.71□□□□□ -0.21
PTPRO-202ENST00000348962 OR5B3Q8NH48 314 aa13.71□□□□□ -0.21
PTPRO-202ENST00000348962 PTPMT1Q8WUK0 201 aaPredicted RBP13.71□□□□□ -0.21
PTPRO-202ENST00000348962 GRAMD2BQ96HH9 432 aa13.71□□□□□ -0.21
PTPRO-202ENST00000348962 GMPPAQ96IJ6 420 aaPredicted RBP13.71□□□□□ -0.21
PTPRO-202ENST00000348962 HEXA-AS1Q9H8Q6 139 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms