RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 DNAJB12Q9NXW2 375 aaKnown RBP9.69□□□□□ -0.86
CLCN6-202ENST00000346436 LIPGQ9Y5X9 500 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 SCN2AQ99250 2005 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 TEX51A0A1B0GUA7 166 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 CDK2AP1O14519 115 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 SULT1B1O43704 296 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 GLI4P10075 376 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 MAGEA5P43359 124 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 FUT6P51993 359 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 FUT5Q11128 374 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 GLIPR1L1Q6UWM5 242 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 OR2M7Q8NG81 312 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 OR4S1Q8NGB4 309 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 SF3B5Q9BWJ5 86 aaKnown RBP9.69□□□□□ -0.86
CLCN6-202ENST00000346436 CXXC4Q9H2H0 198 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 HLA-HP01893 362 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 NME2P22392 152 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 HOXD11P31277 338 aaPredicted RBP9.69□□□□□ -0.86
CLCN6-202ENST00000346436 BPIFB3P59826 476 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 FZD5Q13467 585 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 ATPAF1Q5TC12 328 aaPredicted RBP9.69□□□□□ -0.86
CLCN6-202ENST00000346436 UNQ9370/PRO34162Q6UXP9 181 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 SCARB1Q8WTV0 552 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 TMEM231Q9H6L2 316 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 FLRT3Q9NZU0 649 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 SPTBP11277 2137 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 A1L4Q6 167 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 PRSS37A4D1T9 235 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 C4orf51C9J302 202 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 ARPC3O15145 178 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 TSPAN15O95858 294 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 PEBP1P30086 187 aaKnown RBP9.69□□□□□ -0.86
CLCN6-202ENST00000346436 LGALS7P47929 136 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 NKX6-1P78426 367 aaPredicted RBP9.69□□□□□ -0.86
CLCN6-202ENST00000346436 SHISA5Q8N114 240 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 OR11H7Q8NGC8 314 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 FAM60AQ9NP50 221 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 LOC285556D6RIA3 1793 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 TRAV1-2A0A0B4J238 106 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 SHISA8B8ZZ34 492 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 CDKN2AP42771 156 aaKnown RBP9.69□□□□□ -0.86
CLCN6-202ENST00000346436 RAB7AP51149 207 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 SNTB1Q13884 538 aaKnown RBP9.69□□□□□ -0.86
CLCN6-202ENST00000346436 OR10R2Q8NGX6 335 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 WDR89Q96FK6 387 aaPredicted RBP9.69□□□□□ -0.86
CLCN6-202ENST00000346436 CLN8Q9UBY8 286 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 PPP1R3CQ9UQK1 317 aa9.69□□□□□ -0.86
CLCN6-202ENST00000346436 IMPA2O14732 288 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 SEMA7AO75326 666 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 COX7A1P24310 79 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 SLC6A1P30531 599 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 HAAOP46952 286 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 LIMS1P48059 325 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 PPP1CBP62140 327 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 BAXQ07812 192 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 P2RY6Q15077 328 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 FAHD2BQ6P2I3 314 aaPredicted RBP9.68□□□□□ -0.86
CLCN6-202ENST00000346436 CBLN3Q6UW01 205 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 SAP25Q8TEE9 199 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 FAHD2AQ96GK7 314 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 ANGPTL7O43827 346 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 GNB3P16520 340 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 TMEM52Q8NDY8 209 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 DUSP18Q8NEJ0 188 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 YIPF5Q969M3 257 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 ZCCHC4Q9H5U6 513 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.68□□□□□ -0.86
CLCN6-202ENST00000346436 CHD5Q8TDI0 1954 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 SBF1O95248 1867 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 WDR90Q96KV7 1748 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 A0A0D9SG52 128 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 LIFP15018 202 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 CTSSP25774 331 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 ALDH3B1P43353 468 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 PAFAH1B2P68402 229 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 INO80CQ6PI98 192 aaPredicted RBP9.68□□□□□ -0.86
CLCN6-202ENST00000346436 DRAM2Q6UX65 266 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 SLC51BQ86UW2 128 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 FAM58AQ8N1B3 248 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 OR51E1Q8TCB6 317 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 RDH5Q92781 318 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 TMEM56Q96MV1 263 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 MOGAT1Q96PD6 335 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 LIN7CQ9NUP9 197 aaKnown RBP9.68□□□□□ -0.86
CLCN6-202ENST00000346436 A0A087WUJ7 227 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 ADRA2AP08913 450 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 SNRPNP63162 240 aaKnown RBP9.68□□□□□ -0.86
CLCN6-202ENST00000346436 BAMBIQ13145 260 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 SPATA46Q5T0L3 261 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 C1QTNF12Q5T7M4 302 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 MRM1Q6IN84 353 aaKnown RBP9.68□□□□□ -0.86
CLCN6-202ENST00000346436 FAM181AQ8N9Y4 354 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 RBMXL1Q96E39 390 aaKnown RBP9.68□□□□□ -0.86
CLCN6-202ENST00000346436 SDHCQ99643 169 aaPredicted RBP9.68□□□□□ -0.86
CLCN6-202ENST00000346436 ATP5SQ99766 215 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 FOXJ3Q9UPW0 622 aa9.68□□□□□ -0.86
CLCN6-202ENST00000346436 KRBOX1C9JBD0 128 aa9.67□□□□□ -0.86
CLCN6-202ENST00000346436 PMS2P2O95744 297 aa9.67□□□□□ -0.86
CLCN6-202ENST00000346436 HPXP02790 462 aa9.67□□□□□ -0.86
CLCN6-202ENST00000346436 SNRNP70P08621 437 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms