RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 MYPOPQ86VE0 399 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-202ENST00000345356 ADAD2Q8NCV1 583 aaKnown RBP10.84□□□□□ -0.67
COL12A1-202ENST00000345356 CNTD2Q9H8S5 307 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 MMACHCQ9Y4U1 282 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 TMIGD3P0DMS9 266 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-202ENST00000345356 ELOBQ15370 118 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 C16orf52Q8NHV5 167 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 DPF1Q92782 380 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 NEIL1Q96FI4 390 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-202ENST00000345356 PBX4Q9BYU1 374 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 GPR61Q9BZJ8 451 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 NUP214P35658 2090 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-202ENST00000345356 RRP8O43159 456 aaKnown RBP10.84□□□□□ -0.67
COL12A1-202ENST00000345356 BMP5P22003 454 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 DYNLT3P51808 116 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 HSD17B7P56937 341 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 TAS2R60P59551 318 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 R3HDMLQ9H3Y0 253 aa10.84□□□□□ -0.67
COL12A1-202ENST00000345356 ICOSLGO75144 302 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 NTN1O95631 604 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 HRASP01112 189 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 KRASP01116 189 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 FBP1P09467 338 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 EIF1P41567 113 aaKnown RBP10.83□□□□□ -0.68
COL12A1-202ENST00000345356 GPM6AP51674 278 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 CASP6P55212 293 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 RPS16P62249 146 aaKnown RBP10.83□□□□□ -0.68
COL12A1-202ENST00000345356 RPEL1Q2QD12 228 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 HFEQ30201 348 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 LAMTOR1Q6IAA8 161 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 TRIB1Q96RU8 372 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 IL21Q9HBE4 155 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 TREM2Q9NZC2 230 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 METTL1Q9UBP6 276 aaKnown RBP10.83□□□□□ -0.68
COL12A1-202ENST00000345356 SLC38A11Q08AI6 406 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 EDDM3AQ14507 147 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 SLC35E1Q96K37 410 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 RAB40CQ96S21 281 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 TPSD1Q9BZJ3 242 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 A0A1B0GTQ1 180 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 ZNF732B4DXR9 585 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 G3V3Y1 287 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 ZNF253O75346 499 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 FZD2Q14332 565 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 ZNF738Q8NE65 137 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 HIST1H2BAQ96A08 127 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 KTI12Q96EK9 354 aaPredicted RBP10.83□□□□□ -0.68
COL12A1-202ENST00000345356 MRM2Q9UI43 246 aaKnown RBP10.83□□□□□ -0.68
COL12A1-202ENST00000345356 NOSIPQ9Y314 301 aaKnown RBP10.83□□□□□ -0.68
COL12A1-202ENST00000345356 ZFC3H1O60293 1989 aaKnown RBP10.83□□□□□ -0.68
COL12A1-202ENST00000345356 C3orf85A0A1B0GTC6 90 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 GCGP01275 180 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 HLA-DQB1P01920 261 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 CD99P14209 185 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 ARL16Q0P5N6 197 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 MORN1Q5T089 497 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 M1APQ8TC57 530 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 HDAC8Q9BY41 377 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 MARCH5Q9NX47 278 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 ABLIM3O94929 683 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 SEC11BP0C7V7 166 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 ENPP1P22413 925 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 C21orf58P58505 322 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 RUNX2Q13950 521 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 HLA-DRB5Q30154 266 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 SLC25A26Q70HW3 274 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 FA2HQ7L5A8 372 aa10.83□□□□□ -0.68
COL12A1-202ENST00000345356 ALX4Q9H161 411 aaPredicted RBP10.83□□□□□ -0.68
COL12A1-202ENST00000345356 MBNL1Q9NR56 388 aaKnown RBP10.83□□□□□ -0.68
COL12A1-202ENST00000345356 PTRH2Q9Y3E5 179 aaKnown RBP10.83□□□□□ -0.68
COL12A1-202ENST00000345356 CDKN2AP42771 156 aaKnown RBP10.82□□□□□ -0.68
COL12A1-202ENST00000345356 NHLH1Q02575 133 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 DHRS7BQ6IAN0 325 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-202ENST00000345356 WDR73Q6P4I2 378 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 NAGKQ9UJ70 344 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 CDC14BO60729 498 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 CT45A10P0DMU9 189 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 HOXB1P14653 301 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-202ENST00000345356 OR3A1P47881 315 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 CNN1P51911 297 aaKnown RBP10.82□□□□□ -0.68
COL12A1-202ENST00000345356 ACER2Q5QJU3 275 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 LANCL3Q6ZV70 420 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 RPS4Y2Q8TD47 263 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 MRPS18AQ9NVS2 196 aaKnown RBP10.82□□□□□ -0.68
COL12A1-202ENST00000345356 OR1A1Q9P1Q5 309 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 RCC2Q9P258 522 aaKnown RBP10.82□□□□□ -0.68
COL12A1-202ENST00000345356 SIRT4Q9Y6E7 314 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-202ENST00000345356 M0R2Z0 102 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 SEMA7AO75326 666 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 TMEM11P17152 192 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 SULT1A2P50226 295 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 ABHD17BQ5VST6 288 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 C6orf201Q7Z4U5 140 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 MRGPREQ86SM8 312 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 CA13Q8N1Q1 262 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 CBLN4Q9NTU7 201 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 DOK5Q9P104 306 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 VSIG4Q9Y279 399 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 SIRPB1O00241 398 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 ST8SIA5O15466 376 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms