RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 TMED7-TICAM2A0A0A6YYA0 188 aa13.11□□□□□ -0.31
CLCN1-201ENST00000343257 C5AR1P21730 350 aa13.11□□□□□ -0.31
CLCN1-201ENST00000343257 CTNNB1P35222 781 aa13.11□□□□□ -0.31
CLCN1-201ENST00000343257 RAB1AP62820 205 aa13.11□□□□□ -0.31
CLCN1-201ENST00000343257 POU3F1Q03052 451 aaPredicted RBP13.11□□□□□ -0.31
CLCN1-201ENST00000343257 FAM180AQ6UWF9 173 aa13.11□□□□□ -0.31
CLCN1-201ENST00000343257 GALNT14Q96FL9 552 aa13.11□□□□□ -0.31
CLCN1-201ENST00000343257 OR5H15A6NDH6 313 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 OR5H1A6NKK0 313 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 GAPDHP04406 335 aaKnown RBP13.1□□□□□ -0.31
CLCN1-201ENST00000343257 GABRR1P24046 479 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 AFF3P51826 1226 aaKnown RBP13.1□□□□□ -0.31
CLCN1-201ENST00000343257 RRADP55042 308 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 SGCBQ16585 318 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 OOSP2Q86WS3 158 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 TOX2Q96NM4 488 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 TMEM184BQ9Y519 407 aaPredicted RBP13.1□□□□□ -0.31
CLCN1-201ENST00000343257 A0A0J9YY10 115 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 NPIPA5E9PKD4 350 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 CHRM2P08172 466 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 CDAP32320 146 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 PRTGQ2VWP7 1150 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 BRICD5Q6PL45 260 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 ZNF429Q86V71 674 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 CYB561D1Q8N8Q1 229 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 OR52M1Q8NGK5 317 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 EMG1Q92979 244 aaKnown RBP13.1□□□□□ -0.31
CLCN1-201ENST00000343257 LIN37Q96GY3 246 aaPredicted RBP13.1□□□□□ -0.31
CLCN1-201ENST00000343257 THOC3Q96J01 351 aaKnown RBP13.1□□□□□ -0.31
CLCN1-201ENST00000343257 PACRGQ96M98 296 aaPredicted RBP13.1□□□□□ -0.31
CLCN1-201ENST00000343257 TBL1XR1Q9BZK7 514 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 CA14Q9ULX7 337 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 NPIPA1Q9UND3 350 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 SRPK3Q9UPE1 567 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 RP1P56715 2156 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 SHISA8B8ZZ34 492 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 CYTIPO60759 359 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 SCAF4O95104 1147 aaKnown RBP13.1□□□□□ -0.31
CLCN1-201ENST00000343257 PGA4P0DJD7 388 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 PGA5P0DJD9 388 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 OPRM1P35372 400 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 TM4SF4P48230 202 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 PKIAP61925 76 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.1□□□□□ -0.31
CLCN1-201ENST00000343257 CARD17Q5XLA6 110 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 OGFOD3Q6PK18 319 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 C6orf201Q7Z4U5 140 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 C1QL4Q86Z23 238 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 OR2G3Q8NGZ4 309 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 C11orf40Q8WZ69 217 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 YPEL4Q96NS1 127 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 VN1R1Q9GZP7 353 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 FAM206AQ9NX38 181 aa13.1□□□□□ -0.31
CLCN1-201ENST00000343257 NXT1Q9UKK6 140 aaKnown RBP13.1□□□□□ -0.31
CLCN1-201ENST00000343257 A0A087WZY1 265 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 FAM221AA4D161 298 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 RBFOX3A6NFN3 312 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 DHRS7CA6NNS2 312 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 PLPP3O14495 311 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 AHSA1O95433 338 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 ISG15P05161 165 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 IL12BP29460 328 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 RND3P61587 244 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 OR8G1Q15617 311 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 NKAIN1Q4KMZ8 207 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 LHFPL1Q86WI0 220 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 ZNF248Q8NDW4 579 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 OR5L1Q8NGL2 311 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 KCNG3Q8TAE7 436 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 ABHD5Q8WTS1 349 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 C5orf34Q96MH7 638 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 WDR92Q96MX6 357 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 ADAM19Q9H013 955 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 OR10A2Q9H208 303 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 GPR84Q9NQS5 396 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 CLDN16Q9Y5I7 305 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 PHF3Q92576 2039 aaKnown RBP13.09□□□□□ -0.31
CLCN1-201ENST00000343257 ADAM10O14672 748 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 GSTP1P09211 210 aaKnown RBP13.09□□□□□ -0.31
CLCN1-201ENST00000343257 APLNRP35414 380 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 SLC37A1P57057 533 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 SLC26A5P58743 744 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 TLE1Q04724 770 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 CLEC12BQ2HXU8 276 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 TANGO2Q6ICL3 276 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 DPPA2Q7Z7J5 298 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 TSLPQ969D9 159 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 ZNF319Q9P2F9 582 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 HSF4Q9ULV5 492 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 MYO7BQ6PIF6 2116 aa13.09□□□□□ -0.31
CLCN1-201ENST00000343257 TDRD6O60522 2096 aaKnown RBP13.09□□□□□ -0.31
CLCN1-201ENST00000343257 FAM24AA6NFZ4 105 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 FIGNL2A6NMB9 653 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 HPNP05981 417 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 OR5AC1P0C628 307 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 SEC11BP0C7V7 166 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 NR2C1P13056 603 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 PIGPP57054 158 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 C16orf47Q6ZP98 133 aaPredicted RBP13.08□□□□□ -0.32
CLCN1-201ENST00000343257 OR5AS1Q8N127 324 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms