RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 RTN4IP1Q8WWV3 396 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-202ENST00000343090 H1FXQ92522 213 aaKnown RBP7.2□□□□□ -1.26
UBE4B-202ENST00000343090 ARHGAP5-AS1Q96IT6 56 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 C2orf50Q96LR7 162 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 HIPK2Q9H2X6 1198 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 MRM2Q9UI43 246 aaKnown RBP7.2□□□□□ -1.26
UBE4B-202ENST00000343090 DMRT1Q9Y5R6 373 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 C7orf77A4D0Y5 90 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 ARPC3O15145 178 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 MOSPD3O75425 235 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 FKBP2P26885 142 aaKnown RBP7.2□□□□□ -1.26
UBE4B-202ENST00000343090 CD96P40200 585 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 PSG6Q00889 435 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 INSM1Q01101 510 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-202ENST00000343090 OR8G1Q15617 311 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 PRSS53Q2L4Q9 553 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 CEACAM16Q2WEN9 425 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 GVQW1Q8N7I0 195 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 TMEM178AQ8NBL3 297 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 ARV1Q9H2C2 271 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 SCN3AQ9NY46 2000 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 H3BP45 60 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 SMAD4Q13485 552 aaKnown RBP7.2□□□□□ -1.26
UBE4B-202ENST00000343090 PPP1R1AQ13522 171 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 DCAF12L2Q5VW00 463 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 DMKNQ6E0U4 476 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-202ENST00000343090 LURAP1LQ8IV03 231 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 NECAP1Q8NC96 275 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 OR2AE1Q8NHA4 323 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 C19orf12Q9NSK7 152 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 MTFP1Q9UDX5 166 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 RNF150Q9ULK6 438 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 ZNF831Q5JPB2 1677 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 SPINT1O43278 529 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 SPINK2P20155 84 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 H3F3AP84243 136 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 TMEM52Q8NDY8 209 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 OR52N4Q8NGI2 321 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 SLC39A7Q92504 469 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 WFDC6Q9BQY6 131 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 RTL8AQ9BWD3 113 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 LOXL2Q9Y4K0 774 aa7.2□□□□□ -1.26
UBE4B-202ENST00000343090 MEX3AA1L020 520 aaKnown RBP7.19□□□□□ -1.26
UBE4B-202ENST00000343090 CXorf65A6NEN9 183 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 SPINT2O43291 252 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 GSTP1P09211 210 aaKnown RBP7.19□□□□□ -1.26
UBE4B-202ENST00000343090 GLRA1P23415 457 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 PEBP1P30086 187 aaKnown RBP7.19□□□□□ -1.26
UBE4B-202ENST00000343090 RRADP55042 308 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 HLA-BQ31612 363 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 WIPI1Q5MNZ9 446 aaPredicted RBP7.19□□□□□ -1.26
UBE4B-202ENST00000343090 TIPARPQ7Z3E1 657 aaKnown RBP7.19□□□□□ -1.26
UBE4B-202ENST00000343090 OR5AP2Q8NGF4 316 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 MENTQ9BUN1 341 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 FSCN3Q9NQT6 498 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 PRR13Q9NZ81 148 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 TRPM6Q9BX84 2022 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 MIA3Q5JRA6 1907 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 A0A1W2PPE2 198 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 MED19A0JLT2 244 aaPredicted RBP7.19□□□□□ -1.26
UBE4B-202ENST00000343090 OR3A4PP47883 348 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 ZNF141Q15928 474 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 CLEC12BQ2HXU8 276 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 ACER2Q5QJU3 275 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 H2BFWTQ7Z2G1 175 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 OR11G2Q8NGC1 345 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 OR2I1PQ8NGU4 316 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 RGP1Q92546 391 aaPredicted RBP7.19□□□□□ -1.26
UBE4B-202ENST00000343090 UBL7Q96S82 380 aaPredicted RBP7.19□□□□□ -1.26
UBE4B-202ENST00000343090 TXN2Q99757 166 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 TLNRD1Q9H1K6 362 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 IGHV1OR21-1A0A087WYE8 117 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 PPP5D1E7EU14 171 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 M0R143 59 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 SLC31A2O15432 143 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 PNPP00491 289 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 HNF1AP20823 631 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 RPL29P47914 159 aaKnown RBP7.19□□□□□ -1.26
UBE4B-202ENST00000343090 GPM6AP51674 278 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 FBXL14Q8N1E6 418 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 OSR2Q8N2R0 312 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 DEFB108BQ8NET1 73 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 OR11L1Q8NGX0 322 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 B3GAT1Q9P2W7 334 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 HDGFL3Q9Y3E1 203 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 STRAPQ9Y3F4 350 aaKnown RBP7.19□□□□□ -1.26
UBE4B-202ENST00000343090 ZNF732B4DXR9 585 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 AQP7O14520 342 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 SEMA7AO75326 666 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 EPPINO95925 133 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 PATE4P0C8F1 98 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 PSMB3P49720 205 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 CLN3Q13286 438 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 TMEM128Q5BJH2 165 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 MESTQ5EB52 335 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 THNSL2Q86YJ6 484 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 SPEM1Q8N4L4 309 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 COMMD1Q8N668 190 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 OR10AC1Q8NH08 325 aa7.19□□□□□ -1.26
UBE4B-202ENST00000343090 GPX8Q8TED1 209 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms