RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 HOXB5P09067 269 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 ZNF92Q03936 586 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 PIGYQ3MUY2 71 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 ABHD17BQ5VST6 288 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 ZDHHC22Q8N966 263 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 THAP6Q8TBB0 222 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 SCARB1Q8WTV0 552 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 TMEM230Q96A57 120 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 PCNX2A6NKB5 2137 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 KANTRA0A1W2PQU2 76 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 IGHEP01854 428 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 GP1BAP07359 652 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 CTSSP25774 331 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 MPGP29372 298 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 RAB35Q15286 201 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 CLPPQ16740 277 aaPredicted RBP9.01□□□□□ -0.97
LIMA1-201ENST00000341247 ELP2Q6IA86 826 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 CLEC18BQ6UXF7 455 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 BORCS8Q96FH0 119 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 PPA2Q9H2U2 334 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 ZNF107Q9UII5 783 aaPredicted RBP9.01□□□□□ -0.97
LIMA1-201ENST00000341247 NOSIPQ9Y314 301 aaKnown RBP9.01□□□□□ -0.97
LIMA1-201ENST00000341247 SVILO95425 2214 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 DHRS7CA6NNS2 312 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 ZNF587BE7ETH6 402 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 RPA2P15927 270 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 OTX1P32242 354 aaPredicted RBP9.01□□□□□ -0.97
LIMA1-201ENST00000341247 RIPPLY1Q0D2K3 151 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 MOB3CQ70IA8 216 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 FNDC9Q8TBE3 224 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 SSC4DQ8WTU2 575 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 KCNE4Q8WWG9 221 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 PP6455Q8WZ26 134 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 ST8SIA2Q92186 375 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 PRRG4Q9BZD6 226 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 METTL8Q9H825 291 aaKnown RBP9.01□□□□□ -0.97
LIMA1-201ENST00000341247 GPR35Q9HC97 309 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 FBLN5Q9UBX5 448 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 CSAG2Q9Y5P2 127 aa9.01□□□□□ -0.97
LIMA1-201ENST00000341247 ADGRG4Q8IZF6 3080 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 KIAA1549Q9HCM3 1950 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 ZNF292O60281 2723 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 F5H0A9 414 aaPredicted RBP9□□□□□ -0.97
LIMA1-201ENST00000341247 C3orf80F5H4A9 247 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 MRPL33O75394 65 aaKnown RBP9□□□□□ -0.97
LIMA1-201ENST00000341247 HLA-HP01893 362 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 SP9P0CG40 484 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 CRYGSP22914 178 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 CPT2P23786 658 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 ARHGDIBP52566 201 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 PLGLB1Q02325 96 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 FOXO1Q12778 655 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 PABPC1L2AQ5JQF8 200 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 TUSC5Q8IXB3 177 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 DCUN1D4Q92564 292 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 TOMM40LQ969M1 308 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 CDC6Q99741 560 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 SF3B5Q9BWJ5 86 aaKnown RBP9□□□□□ -0.97
LIMA1-201ENST00000341247 MS4A7Q9GZW8 240 aaPredicted RBP9□□□□□ -0.97
LIMA1-201ENST00000341247 WNT5BQ9H1J7 359 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 PCDHGA1Q9Y5H4 931 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 RNF222A6NCQ9 220 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 IGLV3-1P01715 115 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 UBBP0CG47 229 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 NAT2P11245 290 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 ARPC4P59998 168 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 SCRN3Q0VDG4 424 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 OR1C1Q15619 314 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 ANKRD55Q3KP44 614 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 DRAM2Q6UX65 266 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 SLC51BQ86UW2 128 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 TMEM17Q86X19 198 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 OR52H1Q8NGJ2 320 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 ADGRG7Q96K78 797 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 OR2H1Q9GZK4 316 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 CHMP1AQ9HD42 196 aaPredicted RBP9□□□□□ -0.97
LIMA1-201ENST00000341247 GPR132Q9UNW8 380 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 OR6C65A6NJZ3 312 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 GEMIN2O14893 280 aaKnown RBP9□□□□□ -0.97
LIMA1-201ENST00000341247 NEURL1O76050 574 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 DUS4LO95620 317 aaKnown RBP9□□□□□ -0.97
LIMA1-201ENST00000341247 NRASP01111 189 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 SFTPBP07988 381 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 GSK3AP49840 483 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 FXYD4P59646 89 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 HIST1H3AP68431 136 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 TMEM128Q5BJH2 165 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 HIST2H3PS2Q5TEC6 136 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 PLCXD3Q63HM9 321 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 RGS7BPQ6MZT1 257 aaPredicted RBP9□□□□□ -0.97
LIMA1-201ENST00000341247 TMEM65Q6PI78 240 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 FOXL2NBQ6ZUU3 175 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 HIST2H3AQ71DI3 136 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 SULF2Q8IWU5 870 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 INTS12Q96CB8 462 aaKnown RBP9□□□□□ -0.97
LIMA1-201ENST00000341247 ZNF2Q9BSG1 426 aaPredicted RBP9□□□□□ -0.97
LIMA1-201ENST00000341247 SLC7A10Q9NS82 523 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 PFDN2Q9UHV9 154 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 TNFSF18Q9UNG2 199 aa9□□□□□ -0.97
LIMA1-201ENST00000341247 TIMM10BQ9Y5J6 103 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms