RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 GALNTL5Q7Z4T8 443 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 BPIFCQ8NFQ6 507 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 OR1S2Q8NGQ3 325 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 EMG1Q92979 244 aaKnown RBP12.73□□□□□ -0.37
TDP2-201ENST00000341060 MARC2Q969Z3 335 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 ZNF837Q96EG3 531 aaPredicted RBP12.73□□□□□ -0.37
TDP2-201ENST00000341060 SF3B5Q9BWJ5 86 aaKnown RBP12.73□□□□□ -0.37
TDP2-201ENST00000341060 SRXN1Q9BYN0 137 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 PRR13Q9NZ81 148 aa12.73□□□□□ -0.37
TDP2-201ENST00000341060 NSG1A0A0A6YYJ2 146 aa12.72□□□□□ -0.37
TDP2-201ENST00000341060 RAB19A4D1S5 217 aa12.72□□□□□ -0.37
TDP2-201ENST00000341060 GJE1A6NN92 205 aa12.72□□□□□ -0.37
TDP2-201ENST00000341060 CDK2AP1O14519 115 aa12.72□□□□□ -0.37
TDP2-201ENST00000341060 DNPH1O43598 174 aa12.72□□□□□ -0.37
TDP2-201ENST00000341060 CFIP05156 583 aa12.72□□□□□ -0.37
TDP2-201ENST00000341060 CCL4P13236 92 aa12.72□□□□□ -0.37
TDP2-201ENST00000341060 CRYGSP22914 178 aa12.72□□□□□ -0.37
TDP2-201ENST00000341060 GLRA1P23415 457 aa12.72□□□□□ -0.37
TDP2-201ENST00000341060 WDR5BQ86VZ2 330 aa12.72□□□□□ -0.37
TDP2-201ENST00000341060 OR10C1Q96KK4 312 aa12.72□□□□□ -0.37
TDP2-201ENST00000341060 Q96M66 194 aa12.72□□□□□ -0.37
TDP2-201ENST00000341060 ELL3Q9HB65 397 aaPredicted RBP12.72□□□□□ -0.37
TDP2-201ENST00000341060 CYTL1Q9NRR1 136 aa12.72□□□□□ -0.37
TDP2-201ENST00000341060 TMEM100Q9NV29 134 aa12.72□□□□□ -0.37
TDP2-201ENST00000341060 ZNF701Q9NV72 531 aaPredicted RBP12.72□□□□□ -0.37
TDP2-201ENST00000341060 PET100P0DJ07 73 aa12.71□□□□□ -0.37
TDP2-201ENST00000341060 ECI1P42126 302 aa12.71□□□□□ -0.37
TDP2-201ENST00000341060 ZFP36L1Q07352 338 aaKnown RBP12.71□□□□□ -0.37
TDP2-201ENST00000341060 RAB35Q15286 201 aa12.71□□□□□ -0.37
TDP2-201ENST00000341060 PLEKHN1Q494U1 663 aaPredicted RBP12.71□□□□□ -0.37
TDP2-201ENST00000341060 DRAM2Q6UX65 266 aa12.71□□□□□ -0.37
TDP2-201ENST00000341060 C6orf201Q7Z4U5 140 aa12.71□□□□□ -0.37
TDP2-201ENST00000341060 SULF2Q8IWU5 870 aa12.71□□□□□ -0.37
TDP2-201ENST00000341060 GPR137CQ8N3F9 429 aa12.71□□□□□ -0.37
TDP2-201ENST00000341060 SPSB1Q96BD6 273 aa12.71□□□□□ -0.37
TDP2-201ENST00000341060 SGK3Q96BR1 496 aa12.71□□□□□ -0.37
TDP2-201ENST00000341060 LRRC46Q96FV0 321 aa12.71□□□□□ -0.37
TDP2-201ENST00000341060 C2orf50Q96LR7 162 aa12.71□□□□□ -0.37
TDP2-201ENST00000341060 AQP10Q96PS8 301 aa12.71□□□□□ -0.37
TDP2-201ENST00000341060 METTL8Q9H825 291 aaKnown RBP12.71□□□□□ -0.37
TDP2-201ENST00000341060 C12orf4Q9NQ89 552 aa12.71□□□□□ -0.37
TDP2-201ENST00000341060 OR5AC2Q9NZP5 309 aa12.71□□□□□ -0.37
TDP2-201ENST00000341060 MCTS1Q9ULC4 181 aaKnown RBP12.71□□□□□ -0.37
TDP2-201ENST00000341060 SGCEO43556 437 aa12.71□□□□□ -0.38
TDP2-201ENST00000341060 SYNGR3O43761 229 aa12.71□□□□□ -0.38
TDP2-201ENST00000341060 ACKR3P25106 362 aa12.71□□□□□ -0.38
TDP2-201ENST00000341060 RAC3P60763 192 aa12.71□□□□□ -0.38
TDP2-201ENST00000341060 IL15RAQ13261 267 aa12.71□□□□□ -0.38
TDP2-201ENST00000341060 BHLHE23Q8NDY6 225 aa12.71□□□□□ -0.38
TDP2-201ENST00000341060 SEMA6DQ8NFY4 1073 aa12.71□□□□□ -0.38
TDP2-201ENST00000341060 RNF141Q8WVD5 230 aa12.71□□□□□ -0.38
TDP2-201ENST00000341060 ASF1BQ9NVP2 202 aa12.71□□□□□ -0.38
TDP2-201ENST00000341060 PLEKHJ1Q9NW61 149 aa12.71□□□□□ -0.38
TDP2-201ENST00000341060 C14orf166Q9Y224 244 aaKnown RBP12.71□□□□□ -0.38
TDP2-201ENST00000341060 IGKV1D-8A0A087WSZ0 117 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 MSGN1A6NI15 193 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 SIGLEC5O15389 551 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 RRP8O43159 456 aaKnown RBP12.7□□□□□ -0.38
TDP2-201ENST00000341060 SERPINA5P05154 406 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 GABRR1P24046 479 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 AIMP2Q13155 320 aaKnown RBP12.7□□□□□ -0.38
TDP2-201ENST00000341060 STK11Q15831 433 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 ZNF468Q5VIY5 522 aaPredicted RBP12.7□□□□□ -0.38
TDP2-201ENST00000341060 POC1AQ8NBT0 407 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 NARS2Q96I59 477 aaKnown RBP12.7□□□□□ -0.38
TDP2-201ENST00000341060 SLC6A15Q9H2J7 730 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 COL27A1Q8IZC6 1860 aaPredicted RBP12.7□□□□□ -0.38
TDP2-201ENST00000341060 NUPL2O15504 423 aaKnown RBP12.7□□□□□ -0.38
TDP2-201ENST00000341060 CD79AP11912 226 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 FOLR3P41439 243 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 MTCP1P56278 107 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 B3GALT5-AS1P59052 145 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 DEFA5Q01523 94 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 RAB32Q13637 225 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 RSPO4Q2I0M5 234 aaPredicted RBP12.7□□□□□ -0.38
TDP2-201ENST00000341060 NKAPLQ5M9Q1 402 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 RPUSD3Q6P087 351 aaKnown RBP12.7□□□□□ -0.38
TDP2-201ENST00000341060 PLXDC2Q6UX71 529 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 OR2AE1Q8NHA4 323 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 CPNE2Q96FN4 548 aaPredicted RBP12.7□□□□□ -0.38
TDP2-201ENST00000341060 SGCZQ96LD1 299 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 MICU1Q9BPX6 476 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 GPR173Q9NS66 373 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 DECR2Q9NUI1 292 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 DNAJB11Q9UBS4 358 aa12.7□□□□□ -0.38
TDP2-201ENST00000341060 DOCK10Q96BY6 2186 aa12.69□□□□□ -0.38
TDP2-201ENST00000341060 PMS2P1A4D2B8 440 aa12.69□□□□□ -0.38
TDP2-201ENST00000341060 KNG1P01042 644 aa12.69□□□□□ -0.38
TDP2-201ENST00000341060 IFNA2P01563 188 aa12.69□□□□□ -0.38
TDP2-201ENST00000341060 CSTBP04080 98 aaKnown RBP12.69□□□□□ -0.38
TDP2-201ENST00000341060 CST2P09228 141 aa12.69□□□□□ -0.38
TDP2-201ENST00000341060 SRD5A2P31213 254 aa12.69□□□□□ -0.38
TDP2-201ENST00000341060 PTGER4P35408 488 aa12.69□□□□□ -0.38
TDP2-201ENST00000341060 HGFACQ04756 655 aa12.69□□□□□ -0.38
TDP2-201ENST00000341060 PEAR1Q5VY43 1037 aaPredicted RBP12.69□□□□□ -0.38
TDP2-201ENST00000341060 BOLLQ8N9W6 283 aaKnown RBP12.69□□□□□ -0.38
TDP2-201ENST00000341060 OR51F2Q8NH61 342 aa12.69□□□□□ -0.38
TDP2-201ENST00000341060 TMED6Q8WW62 240 aa12.69□□□□□ -0.38
TDP2-201ENST00000341060 REEP6Q96HR9 211 aa12.69□□□□□ -0.38
TDP2-201ENST00000341060 CRLF2Q9HC73 371 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms