RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 OR51S1Q8NGJ8 323 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 OR2AE1Q8NHA4 323 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 FGFBP3Q8TAT2 258 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 SPSB4Q96A44 273 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 BORCS8Q96FH0 119 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 SELENOIQ9C0D9 397 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 PCDHB16Q9NRJ7 776 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 KCNN3Q9UGI6 736 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 FLVCR2Q9UPI3 526 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 MEIKINA0A087WXM9 373 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 hCG_38984A0A1B0GV85 526 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 MBD3L4A6NDZ8 208 aaPredicted RBP13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 MBD3L3A6NE82 208 aaPredicted RBP13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 MBD3L5A6NJ08 208 aaPredicted RBP13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 PRRG2O14669 202 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 ZNF780AO75290 641 aaPredicted RBP13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 NRASP01111 189 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 RLN1P04808 185 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 GLI4P10075 376 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 HIST1H1DP16402 221 aaKnown RBP13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 MPZP25189 248 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 OR3A2P47893 321 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 UQCRFS1P47985 274 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 RBP2P50120 134 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 HGFACQ04756 655 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 FOXF2Q12947 444 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 CDK10Q15131 360 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 PPA1Q15181 289 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 C1orf185Q5T7R7 199 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 FBXW9Q5XUX1 488 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 ZNF626Q68DY1 528 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 TMEM42Q69YG0 159 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 NUFIP2Q7Z417 695 aaKnown RBP13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 FAM89BQ8N5H3 189 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 OR51T1Q8NGJ9 327 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 MBD3L2Q8NHZ7 208 aaPredicted RBP13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 NPRL2Q8WTW4 380 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 WNT2BQ93097 391 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 PIGTQ969N2 578 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 APOBEC3DQ96AK3 386 aaPredicted RBP13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 TM2D1Q9BX74 207 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 ALX4Q9H161 411 aaPredicted RBP13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 METTL9Q9H1A3 318 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 ZMAT3Q9HA38 289 aaKnown RBP13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 GPR173Q9NS66 373 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 SLC2A8Q9NY64 477 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 SH3BGRL2Q9UJC5 107 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 OSGIN2Q9Y236 505 aa13.15□□□□□ -0.3
TUBB4B-201ENST00000340384 FAM208BQ5VWN6 2430 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 A0A096LPE4 126 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 A0A1W2PPZ6 126 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 FIGNL2A6NMB9 653 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 SS18L1O75177 396 aaPredicted RBP13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 CD79AP11912 226 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 MGMTP16455 207 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 GNB3P16520 340 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 RAD52P43351 418 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 FUT6P51993 359 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 ATP1B3P54709 279 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 FAM3AP98173 230 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 TNK1Q13470 666 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 COLCA1Q6ZS62 124 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 BPIFB2Q8N4F0 458 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 SPICQ8N5J4 248 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 TMEM104Q8NE00 496 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 BEST4Q8NFU0 473 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 OR11H7Q8NGC8 314 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 ZFAND1Q8TCF1 268 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 DVL3Q92997 716 aaPredicted RBP13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 CMBLQ96DG6 245 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 DMRTA2Q96SC8 542 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 BANF2Q9H503 90 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 ELL3Q9HB65 397 aaPredicted RBP13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 BEX1Q9HBH7 125 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 ZNF69Q9UC07 566 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 ARHGAP21Q5T5U3 1957 aa13.14□□□□□ -0.31
TUBB4B-201ENST00000340384 PYCARD-AS1I3L0S3 204 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 CA11O75493 328 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 SNAPC5O75971 98 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 CSTBP04080 98 aaKnown RBP13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 TMEM225BP0DP42 221 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 ACKR3P25106 362 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 CEACAM8P31997 349 aaPredicted RBP13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 PTGER4P35408 488 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 CA7P43166 264 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 RBPJQ06330 500 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 EIF2S3LQ2VIR3 472 aaKnown RBP13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 C9orf135Q5VTT2 229 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 IDO2Q6ZQW0 420 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 CCDC36Q8IYA8 594 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 GCNT2Q8N0V5 402 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 FTMTQ8N4E7 242 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 CPEB3Q8NE35 698 aaKnown RBP13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 OR4D10Q8NGI6 311 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 OR1K1Q8NGR3 316 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 NICN1Q9BSH3 213 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 SLA2Q9H6Q3 261 aa13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 MYOZ1Q9NP98 299 aaPredicted RBP13.13□□□□□ -0.31
TUBB4B-201ENST00000340384 MED12LQ86YW9 2145 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms