RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 TFF1P04155 84 aa12.1□□□□□ -0.47
ERCC1-203ENST00000340192 LIPFP07098 398 aa12.1□□□□□ -0.47
ERCC1-203ENST00000340192 AMY2BP19961 511 aa12.1□□□□□ -0.47
ERCC1-203ENST00000340192 IKZF1Q13422 519 aa12.1□□□□□ -0.47
ERCC1-203ENST00000340192 TUSC1Q2TAM9 212 aa12.1□□□□□ -0.47
ERCC1-203ENST00000340192 ATPAF1Q5TC12 328 aaPredicted RBP12.1□□□□□ -0.47
ERCC1-203ENST00000340192 HAGHLQ6PII5 290 aaPredicted RBP12.1□□□□□ -0.47
ERCC1-203ENST00000340192 PRSS35Q8N3Z0 413 aa12.1□□□□□ -0.47
ERCC1-203ENST00000340192 SIGLECL1Q8N7X8 197 aa12.1□□□□□ -0.47
ERCC1-203ENST00000340192 PNLDC1Q8NA58 520 aaKnown RBP12.1□□□□□ -0.47
ERCC1-203ENST00000340192 RHOXF1Q8NHV9 184 aa12.1□□□□□ -0.47
ERCC1-203ENST00000340192 RNF166Q96A37 237 aaPredicted RBP12.1□□□□□ -0.47
ERCC1-203ENST00000340192 PCGF1Q9BSM1 259 aa12.1□□□□□ -0.47
ERCC1-203ENST00000340192 MS4A7Q9GZW8 240 aaPredicted RBP12.1□□□□□ -0.47
ERCC1-203ENST00000340192 ESM1Q9NQ30 184 aa12.1□□□□□ -0.47
ERCC1-203ENST00000340192 FAM118AQ9NWS6 357 aa12.1□□□□□ -0.47
ERCC1-203ENST00000340192 EXOGQ9Y2C4 368 aaKnown RBP12.1□□□□□ -0.47
ERCC1-203ENST00000340192 PQLC2LA1A4F0 135 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 OR2AT4A6NND4 320 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 ZNF879B4DU55 563 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 TRIM77I1YAP6 450 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 SYT7O43581 403 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 NDUFB3O43676 98 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 MPZL2O60487 215 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 ECDO95905 644 aaPredicted RBP12.09□□□□□ -0.47
ERCC1-203ENST00000340192 PLATP00750 562 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 SFTPBP07988 381 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 SELLP14151 372 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 GLRA1P23415 457 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 KIR3DL2P43630 455 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 TGM4P49221 684 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 ZNF91Q05481 1191 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 ZSCAN26Q16670 478 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 C11orf91Q3C1V1 193 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 CDONQ4KMG0 1287 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 RBMS3Q6XE24 437 aaKnown RBP12.09□□□□□ -0.47
ERCC1-203ENST00000340192 KCTD20Q7Z5Y7 419 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 ACBD7Q8N6N7 88 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 ZDHHC22Q8N966 263 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 ANGPTL6Q8NI99 470 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 ZNF671Q8TAW3 534 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 LGALS12Q96DT0 336 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 ADI1Q9BV57 179 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 DNTTIP1Q9H147 329 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 PLEKHA1Q9HB21 404 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 NLKQ9UBE8 527 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 RPUSD1Q9UJJ7 312 aaKnown RBP12.09□□□□□ -0.47
ERCC1-203ENST00000340192 PCDHGB1Q9Y5G3 927 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 ANK2Q01484 3957 aa12.09□□□□□ -0.47
ERCC1-203ENST00000340192 ANKRD61A6NGH8 418 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 NKX6-3A6NJ46 265 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 SLC16A6O15403 523 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 TOX4O94842 621 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 UBCP0CG48 685 aaKnown RBP12.08□□□□□ -0.48
ERCC1-203ENST00000340192 DBTP11182 482 aaKnown RBP12.08□□□□□ -0.48
ERCC1-203ENST00000340192 MMP9P14780 707 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 HAAOP46952 286 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 OR12D2P58182 307 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 LRRC10Q5BKY1 277 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 ZNF788Q6ZQV5 615 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 C9orf139Q6ZV77 190 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 ZNF573Q86YE8 665 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 RDH10Q8IZV5 341 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 OR2G2Q8NGZ5 317 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 FAM216AQ8WUB2 273 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 TMIGD2Q96BF3 282 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 MED30Q96HR3 178 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 Q96MT0 163 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 ZNF48Q96MX3 618 aaPredicted RBP12.08□□□□□ -0.48
ERCC1-203ENST00000340192 WDFY2Q96P53 400 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 GAFA1Q96PS6 74 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 TBX15Q96SF7 602 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 AMBNQ9NP70 447 aa12.08□□□□□ -0.48
ERCC1-203ENST00000340192 SMPD3Q9NY59 655 aaPredicted RBP12.08□□□□□ -0.48
ERCC1-203ENST00000340192 SOX21Q9Y651 276 aaPredicted RBP12.08□□□□□ -0.48
ERCC1-203ENST00000340192 IGKV1D-17A0A075B6S4 117 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 LOC107986453A0A1B0GWG9 222 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 J3QT63 122 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 SYNGR1O43759 233 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 ACAA1P09110 424 aaPredicted RBP12.07□□□□□ -0.48
ERCC1-203ENST00000340192 PSG2P11465 335 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 NANOS3P60323 173 aaKnown RBP12.07□□□□□ -0.48
ERCC1-203ENST00000340192 ARF6P62330 175 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 ACTA2P62736 377 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 ACTG2P63267 376 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 IL13RA1P78552 427 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 UBE2V2Q15819 145 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 DGUOKQ16854 277 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 METTL11BQ5VVY1 283 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 BRD3OSQ6XYD6 125 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 POC1AQ8NBT0 407 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 LY6G5BQ8NDX9 201 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 CCDC54Q8NEL0 328 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 TRMT10AQ8TBZ6 339 aaKnown RBP12.07□□□□□ -0.48
ERCC1-203ENST00000340192 C4orf36Q96KX1 117 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 ZNF488Q96MN9 340 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 SIRPDQ9H106 197 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 CNTD2Q9H8S5 307 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 RASL12Q9NYN1 266 aa12.07□□□□□ -0.48
ERCC1-203ENST00000340192 FRRS1LQ9P0K9 344 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms