RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 C10orf91Q5T1B1 145 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 OR10K2Q6IF99 312 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 MRPL14Q6P1L8 145 aaKnown RBP9.45□□□□□ -0.9
RTN3-201ENST00000338850 PRSS54Q6PEW0 395 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 GLIPR1L1Q6UWM5 242 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 IL34Q6ZMJ4 242 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 ANGPTL5Q86XS5 388 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 WDFY1Q8IWB7 410 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 KDM8Q8N371 416 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 FDCSPQ8NFU4 85 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 OR4S1Q8NGB4 309 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 CPT1CQ8TCG5 803 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 NUDCD2Q8WVJ2 157 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 PCNPQ8WW12 178 aaKnown RBP9.45□□□□□ -0.9
RTN3-201ENST00000338850 EMG1Q92979 244 aaKnown RBP9.45□□□□□ -0.9
RTN3-201ENST00000338850 PIK3IP1Q96FE7 263 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 SELENOIQ9C0D9 397 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 SLC6A15Q9H2J7 730 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 CHMP1AQ9HD42 196 aaPredicted RBP9.45□□□□□ -0.9
RTN3-201ENST00000338850 OSGIN2Q9Y236 505 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 POLR1DQ9Y2S0 133 aa9.45□□□□□ -0.9
RTN3-201ENST00000338850 TNRC6AQ8NDV7 1962 aaKnown RBP9.44□□□□□ -0.9
RTN3-201ENST00000338850 RELNP78509 3460 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 SPTBN1Q01082 2364 aaKnown RBP9.44□□□□□ -0.9
RTN3-201ENST00000338850 A0A0A6YYD4 124 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 GMFGO60234 142 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 DHRS3O75911 302 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 CD79AP11912 226 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 ZNF43P17038 809 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 MSR1P21757 451 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 GNLYP22749 145 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 OTX2P32243 289 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 LUMP51884 338 aaPredicted RBP9.44□□□□□ -0.9
RTN3-201ENST00000338850 ATP1B3P54709 279 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 ZNF121P58317 390 aaPredicted RBP9.44□□□□□ -0.9
RTN3-201ENST00000338850 IL15RAQ13261 267 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 MICBQ29980 383 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 TMPPEQ6ZT21 453 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 ABHD12BQ7Z5M8 362 aaPredicted RBP9.44□□□□□ -0.9
RTN3-201ENST00000338850 ZNF101Q8IZC7 436 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 Q8NA96 180 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 CHST4Q8NCG5 386 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 GJC3Q8NFK1 279 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 OR5AP2Q8NGF4 316 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 OR52H1Q8NGJ2 320 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 OR51E1Q8TCB6 317 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 MARC2Q969Z3 335 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 SAT2Q96F10 170 aaPredicted RBP9.44□□□□□ -0.9
RTN3-201ENST00000338850 PSMG3-AS1Q96PY0 264 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 DMRTA2Q96SC8 542 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 NPAS1Q99742 590 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 ZNF471Q9BX82 626 aaPredicted RBP9.44□□□□□ -0.9
RTN3-201ENST00000338850 CHST5Q9GZS9 411 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 WDR13Q9H1Z4 485 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 NELFAQ9H3P2 528 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 METTL7AQ9H8H3 244 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 FN3KRPQ9HA64 309 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 GPR84Q9NQS5 396 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 MBD2Q9UBB5 411 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 ZNF391Q9UJN7 358 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 EDARQ9UNE0 448 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 VDAC3Q9Y277 283 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 CARHSP1Q9Y2V2 147 aaKnown RBP9.44□□□□□ -0.9
RTN3-201ENST00000338850 MEMO1Q9Y316 297 aa9.44□□□□□ -0.9
RTN3-201ENST00000338850 PRRC2CQ9Y520 2896 aaKnown RBP9.43□□□□□ -0.9
RTN3-201ENST00000338850 ZNF726A6NNF4 738 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 H3BSH0 61 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 CDK2AP1O14519 115 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 TOR1AO14656 332 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 MTRF1O75570 445 aaKnown RBP9.43□□□□□ -0.9
RTN3-201ENST00000338850 CPT2P23786 658 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 PMELP40967 661 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 FOLR3P41439 243 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 FOXL2P58012 376 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 SSPNQ14714 243 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 TAF13Q15543 124 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 EXT1Q16394 746 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 PRR30Q53SZ7 412 aaPredicted RBP9.43□□□□□ -0.9
RTN3-201ENST00000338850 PLAC9Q5JTB6 97 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 ELP2Q6IA86 826 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 EIF5AL1Q6IS14 154 aaKnown RBP9.43□□□□□ -0.9
RTN3-201ENST00000338850 OPN5Q6U736 354 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 CD163Q86VB7 1156 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 PRSS58Q8IYP2 241 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 RBMXL3Q8N7X1 1067 aaKnown RBP9.43□□□□□ -0.9
RTN3-201ENST00000338850 OR2Y1Q8NGV0 311 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 OR5H2Q8NGV7 314 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 RNF141Q8WVD5 230 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 ARL11Q969Q4 196 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 TMEM230Q96A57 120 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 SPSB1Q96BD6 273 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 C2orf50Q96LR7 162 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 IP6K3Q96PC2 410 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 RASL10BQ96S79 203 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 SF3B5Q9BWJ5 86 aaKnown RBP9.43□□□□□ -0.9
RTN3-201ENST00000338850 OR10A2Q9H208 303 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 C5orf66Q9H5L9 145 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 LUZP4Q9P127 313 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 ZNF230Q9UIE0 474 aaPredicted RBP9.43□□□□□ -0.9
RTN3-201ENST00000338850 HSF4Q9ULV5 492 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms