RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 SULT1A4P0DMN0 295 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 RRASP10301 218 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 HYAL1Q12794 435 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 WIPI1Q5MNZ9 446 aaPredicted RBP12.27□□□□□ -0.45
RTN4-202ENST00000337526 NCR3LG1Q68D85 454 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 ZAR1Q86SH2 424 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 CORO2AQ92828 525 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 MMP26Q9NRE1 261 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 LOXL2Q9Y4K0 774 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 A0A1W2PPV9 198 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 SEMG1P04279 462 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 CELA2BP08218 269 aaPredicted RBP12.26□□□□□ -0.45
RTN4-202ENST00000337526 GPM6AP51674 278 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 SUB1P53999 127 aaKnown RBP eCLIP12.26□□□□□ -0.457e-16■■■□□ 18.3
RTN4-202ENST00000337526 B3GNTL1Q67FW5 361 aaPredicted RBP12.26□□□□□ -0.45
RTN4-202ENST00000337526 BTNL8Q6UX41 500 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 EGLN1Q9GZT9 426 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 MTCH1Q9NZJ7 389 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 LAMP3Q9UQV4 416 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 DLEC1Q9Y238 1755 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 PAPPA2Q9BXP8 1791 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 TUBGCP6Q96RT7 1819 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 TERTO14746 1132 aaKnown RBP12.26□□□□□ -0.45
RTN4-202ENST00000337526 DEFA4P12838 97 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 NQO2P16083 231 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 HOXD11P31277 338 aaPredicted RBP12.26□□□□□ -0.45
RTN4-202ENST00000337526 TLE1Q04724 770 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 OR2T2Q6IF00 324 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 C9orf62Q8N4C0 152 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 ERGIC1Q969X5 290 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 TECTBQ96PL2 329 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 NXF2Q9GZY0 626 aaKnown RBP12.26□□□□□ -0.45
RTN4-202ENST00000337526 ZNF355PQ9NSJ1 428 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 CCDC88CQ9P219 2028 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 GABRA1P14867 456 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 ASCL1P50553 236 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 EDARADDQ8WWZ3 215 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 S1PR3Q99500 378 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 KCNK15Q9H427 330 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 GAR1Q9NY12 217 aaKnown RBP12.26□□□□□ -0.45
RTN4-202ENST00000337526 OR4C45A6NMZ5 311 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 ADAP1O75689 374 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 DTYMKP23919 212 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 ZFP36L2P47974 494 aaKnown RBP12.26□□□□□ -0.45
RTN4-202ENST00000337526 UBE2G1P62253 170 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 RAB35Q15286 201 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 SEZ6L2Q6UXD5 910 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 ZNF574Q6ZN55 896 aaPredicted RBP12.26□□□□□ -0.45
RTN4-202ENST00000337526 SMIM15Q7Z3B0 74 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 SARAFQ96BY9 339 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 RASL12Q9NYN1 266 aa12.26□□□□□ -0.45
RTN4-202ENST00000337526 PMS2P1A4D2B8 440 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 KRASP01116 189 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 SLC25A4P12235 298 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 ZNF250P15622 560 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 SSTP61278 116 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 RPS23P62266 143 aaKnown RBP12.25□□□□□ -0.45
RTN4-202ENST00000337526 ZNF718Q3SXZ3 478 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 PRSS54Q6PEW0 395 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 TSEN54Q7Z6J9 526 aaKnown RBP12.25□□□□□ -0.45
RTN4-202ENST00000337526 TMPRSS13Q9BYE2 586 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 OR7C2O60412 319 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 OR3A4PP47883 348 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 SPATA46Q5T0L3 261 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 OR11H7Q8NGC8 314 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 GALMQ96C23 342 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 MRPS18AQ9NVS2 196 aaKnown RBP12.25□□□□□ -0.45
RTN4-202ENST00000337526 NTMQ9P121 344 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 OPN4Q9UHM6 478 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 FAM96BQ9Y3D0 163 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 RTTNQ86VV8 2226 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 TRAF3IP2O43734 574 aaPredicted RBP12.25□□□□□ -0.45
RTN4-202ENST00000337526 INHBBP09529 407 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 MESTQ5EB52 335 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 ATG4DQ86TL0 474 aaPredicted RBP12.25□□□□□ -0.45
RTN4-202ENST00000337526 VASH2Q86V25 355 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 SKA3Q8IX90 412 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 ADGRG7Q96K78 797 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 PPP1R3EQ9H7J1 279 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 WSB1Q9Y6I7 421 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 CEP250Q9BV73 2442 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 ZNF318Q5VUA4 2279 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 LANCL1O43813 399 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 CNIH1O95406 144 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 IL2RAP01589 272 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 PGA3P0DJD8 388 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 KCNJ3P48549 501 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 LIMK1P53667 647 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 ZNF770Q6IQ21 691 aaPredicted RBP12.25□□□□□ -0.45
RTN4-202ENST00000337526 HSD17B13Q7Z5P4 300 aaPredicted RBP12.25□□□□□ -0.45
RTN4-202ENST00000337526 UBALD1Q8TB05 177 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 PINX1Q96BK5 328 aaKnown RBP12.25□□□□□ -0.45
RTN4-202ENST00000337526 TRMT61AQ96FX7 289 aaKnown RBP12.25□□□□□ -0.45
RTN4-202ENST00000337526 TRIB1Q96RU8 372 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 SOX7Q9BT81 388 aa12.25□□□□□ -0.45
RTN4-202ENST00000337526 CDC14BO60729 498 aa12.24□□□□□ -0.45
RTN4-202ENST00000337526 ONECUT2O95948 504 aa12.24□□□□□ -0.45
RTN4-202ENST00000337526 METTL15P1P0C7V9 234 aa12.24□□□□□ -0.45
RTN4-202ENST00000337526 DVL1P1P54792 670 aaPredicted RBP12.24□□□□□ -0.45
RTN4-202ENST00000337526 TAS2R45P59539 299 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms