RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 MAMSTRQ6ZN01 415 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 SLC25A26Q70HW3 274 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 VN1R4Q7Z5H5 301 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 UBAC2Q8NBM4 344 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 PLPP7Q8NBV4 271 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 NMES1Q9C002 83 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 ACTR3CQ9C0K3 210 aaPredicted RBP6.53□□□□□ -1.36
EPHA3-201ENST00000336596 WDR61Q9GZS3 305 aaKnown RBP6.53□□□□□ -1.36
EPHA3-201ENST00000336596 NARFLQ9H6Q4 476 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 TAS2R4Q9NYW5 299 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 SEC16AO15027 2179 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 C9orf172C9J069 976 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 HOXB3P14651 431 aaPredicted RBP6.53□□□□□ -1.36
EPHA3-201ENST00000336596 NKX2-1P43699 371 aaPredicted RBP6.53□□□□□ -1.36
EPHA3-201ENST00000336596 RAB5BP61020 215 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 ALKBH6Q3KRA9 238 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 PRSS41Q7RTY9 318 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 FAM26EQ8N5C1 309 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 OR2M3Q8NG83 312 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 FAM57AQ8TBR7 257 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 FAM222BQ8WU58 562 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 EXTL1Q92935 676 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 NRTNQ99748 197 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 PIPOXQ9P0Z9 390 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 ST3GAL6Q9Y274 331 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 NTNG1Q9Y2I2 539 aa6.53□□□□□ -1.36
EPHA3-201ENST00000336596 PDCD11Q14690 1871 aaKnown RBP6.53□□□□□ -1.36
EPHA3-201ENST00000336596 GPR31O00270 319 aa6.52□□□□□ -1.36
EPHA3-201ENST00000336596 OR3A4PP47883 348 aa6.52□□□□□ -1.36
EPHA3-201ENST00000336596 AKR1D1P51857 326 aa6.52□□□□□ -1.36
EPHA3-201ENST00000336596 IDO2Q6ZQW0 420 aa6.52□□□□□ -1.36
EPHA3-201ENST00000336596 MUC15Q8N387 334 aa6.52□□□□□ -1.36
EPHA3-201ENST00000336596 KCNK17Q96T54 332 aa6.52□□□□□ -1.36
EPHA3-201ENST00000336596 LRFN3Q9BTN0 628 aa6.52□□□□□ -1.36
EPHA3-201ENST00000336596 ARPC1BO15143 372 aaKnown RBP6.52□□□□□ -1.37
EPHA3-201ENST00000336596 WNT1P04628 370 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 COX7A1P24310 79 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 CASP3P42574 277 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 C21orf58P58505 322 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 FLI1Q01543 452 aaPredicted RBP6.52□□□□□ -1.37
EPHA3-201ENST00000336596 AKR7LQ8NHP1 331 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 MCHR2Q969V1 340 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 CNTNAP3Q9BZ76 1288 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 OR51I2Q9H344 312 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 COA4Q9NYJ1 87 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 CISD1Q9NZ45 108 aaKnown RBP6.52□□□□□ -1.37
EPHA3-201ENST00000336596 TPPPO94811 219 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 LIMS3P0CW19 117 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 LIMS4P0CW20 117 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 HIST1H1CP16403 213 aaKnown RBP6.52□□□□□ -1.37
EPHA3-201ENST00000336596 FAHP16930 419 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 TIAL1Q01085 375 aaKnown RBP eCLIP6.52□□□□□ -1.37
EPHA3-201ENST00000336596 CXorf66Q5JRM2 361 aaPredicted RBP6.52□□□□□ -1.37
EPHA3-201ENST00000336596 B3GNT8Q7Z7M8 397 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 DUSP18Q8NEJ0 188 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 OR52I1Q8NGK6 324 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 OR5D18Q8NGL1 313 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 ASB10Q8WXI3 467 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 ARPC5LQ9BPX5 153 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 GPR35Q9HC97 309 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 PSORS1C1Q9UIG5 152 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 WDR81Q562E7 1941 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 ANK1P16157 1881 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 ST8SIA3O43173 380 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 PRKNO60260 465 aaPredicted RBP6.52□□□□□ -1.37
EPHA3-201ENST00000336596 C20orf204Q6ZNR8 217 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 ZNF511Q8NB15 262 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 BPIFCQ8NFQ6 507 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 MED29Q9NX70 200 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 SLC25A37Q9NYZ2 338 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 TDRD6O60522 2096 aaKnown RBP6.52□□□□□ -1.37
EPHA3-201ENST00000336596 OR2M5A3KFT3 312 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 CDC14BO60729 498 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 OR5G3P0C626 314 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 ACKR3P25106 362 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 SLC37A1P57057 533 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 ACSM6Q6P461 480 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 THNSL2Q86YJ6 484 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 OTOSQ8NHW6 89 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 RNASE6Q93091 150 aaKnown RBP6.52□□□□□ -1.37
EPHA3-201ENST00000336596 VWCEQ96DN2 955 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 DMRTB1Q96MA1 342 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 OR4C12Q96R67 309 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 FUNDC2Q9BWH2 189 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 OR2B2Q9GZK3 357 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 CD300AQ9UGN4 299 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 PILRAQ9UKJ1 303 aa6.52□□□□□ -1.37
EPHA3-201ENST00000336596 C19orf67A6NJJ6 358 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 PLPP3O14495 311 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 WNT9BO14905 357 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 CBR1P16152 277 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 ZNF32P17041 273 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 PPP1CCP36873 323 aaKnown RBP6.51□□□□□ -1.37
EPHA3-201ENST00000336596 COL19A1Q14993 1142 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 RIPPLY2Q5TAB7 128 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 ANKRD34AQ69YU3 496 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 NHLRC2Q8NBF2 726 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 SUCNR1Q9BXA5 334 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 NLKQ9UBE8 527 aa6.51□□□□□ -1.37
EPHA3-201ENST00000336596 LIPT2A6NK58 231 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms