RNA–Protein interactions for RNA: ENST00000335727.13

TNRC6B-202, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 1 (best) BASIC

Gene TNRC6B, Length 17,933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-202ENST00000335727 CXCL3P19876 107 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 DAP3P51398 398 aaKnown RBP4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 NOGQ13253 232 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 PYY3Q5JQD4 70 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 COLCA1Q6ZS62 124 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 LINC01551Q86U37 167 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 OR2V1Q8NHB1 315 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 C1QTNF3Q9BXJ4 246 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 COL1A2P08123 1366 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 TNFRSF10CO14798 259 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 IGF2P01344 180 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 HIST1H1DP16402 221 aaKnown RBP4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 SLC25A51Q9H1U9 297 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 EPHX3Q9H6B9 360 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 OR51F1A6NGY5 319 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 ZFP92A6NM28 416 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 CLDN11O75508 207 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 UNGP13051 313 aaPredicted RBP4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 OR1D5P58170 312 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 C1QTNF8P60827 252 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 DGCR2P98153 550 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 Q1RN00 199 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 DENND4AQ7Z401 1863 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 GABRA6Q16445 453 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 PLBD1Q6P4A8 553 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 TMEM182Q6ZP80 229 aaPredicted RBP4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 OR1L3Q8NH93 324 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 ORAI2Q96SN7 254 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 FBXL17Q9UF56 701 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 LCATP04180 440 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 PRR35P0CG20 571 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 CD300EQ496F6 205 aaPredicted RBP4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.83□□□□□ -1.642e-6■■■□□ 18.1
TNRC6B-202ENST00000335727 GPC2Q8N158 579 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 HIST3H2BBQ8N257 126 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 MARCH1Q8TCQ1 289 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 LINC00470Q9BZP3 86 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 GAGE12JA6NER3 117 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 GAGE7O76087 117 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 GAGE12FP0CL80 117 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 GAGE12GP0CL81 117 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 GAGE12IP0CL82 117 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 XCR1P46094 333 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 GAGE4Q13068 117 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 RBMXL3Q8N7X1 1067 aaKnown RBP4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 PKD1L3Q7Z443 1732 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 OR2W5A6NFC9 320 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 C2CD4BA6NLJ0 364 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 LMX1BO60663 402 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 VENTXO95231 258 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 HTR1DP28221 377 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 PCBP2Q15366 365 aaKnown RBP eCLIP4.83□□□□□ -1.641e-6■■■□□ 18.1
TNRC6B-202ENST00000335727 ITPRIPL2Q3MIP1 535 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 C2orf27AQ580R0 203 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 ZNF787Q6DD87 383 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 MBOAT2Q6ZWT7 520 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 OR10G3Q8NGC4 313 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 OR4K14Q8NGD5 310 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 DYNLRB1Q9NP97 96 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 SMIM30A4D0T7 59 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 OAZ1P54368 228 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 BRICD5Q6PL45 260 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 Q6ZSR9 355 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 DEFB128Q7Z7B8 93 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 UBALD1Q8TB05 177 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 RARRES2Q99969 163 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 GSTO2Q9H4Y5 243 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 B3GAT1Q9P2W7 334 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 ADAMTS5Q9UNA0 930 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 SIGLEC7Q9Y286 467 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 COX5AP20674 150 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 MFAP5Q13361 173 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 OR4D5Q8NGN0 318 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 FIGNL2A6NMB9 653 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 LHFPL2Q6ZUX7 228 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 OR5D14Q8NGL3 314 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 FAM3DQ96BQ1 224 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 DDIT4LQ96D03 193 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 FAM103A1Q9BTL3 118 aaKnown RBP4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 SMG9Q9H0W8 520 aaKnown RBP4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 ZNF257Q9Y2Q1 563 aa4.83□□□□□ -1.64
TNRC6B-202ENST00000335727 IGHV2-70DA0A0C4DH43 119 aa4.82□□□□□ -1.64
TNRC6B-202ENST00000335727 ADAM20O43506 726 aa4.82□□□□□ -1.64
TNRC6B-202ENST00000335727 SOD3P08294 240 aa4.82□□□□□ -1.64
TNRC6B-202ENST00000335727 TGFBR1P36897 503 aa4.82□□□□□ -1.64
TNRC6B-202ENST00000335727 OR1E2P47887 323 aa4.82□□□□□ -1.64
TNRC6B-202ENST00000335727 EIF4EBP2Q13542 120 aaPredicted RBP4.82□□□□□ -1.64
TNRC6B-202ENST00000335727 SMIM19Q96E16 107 aa4.82□□□□□ -1.64
TNRC6B-202ENST00000335727 PDLIM5Q96HC4 596 aaKnown RBP4.82□□□□□ -1.64
TNRC6B-202ENST00000335727 FGF20Q9NP95 211 aaPredicted RBP4.82□□□□□ -1.64
TNRC6B-202ENST00000335727 FAM221AA4D161 298 aa4.82□□□□□ -1.64
TNRC6B-202ENST00000335727 TNFP01375 233 aa4.82□□□□□ -1.64
TNRC6B-202ENST00000335727 BCL2P10415 239 aa4.82□□□□□ -1.64
TNRC6B-202ENST00000335727 TUSC3Q13454 348 aa4.82□□□□□ -1.64
TNRC6B-202ENST00000335727 SPNS2Q8IVW8 549 aa4.82□□□□□ -1.64
TNRC6B-202ENST00000335727 MRPL38Q96DV4 380 aaKnown RBP4.82□□□□□ -1.64
TNRC6B-202ENST00000335727 P2RY12Q9H244 342 aa4.82□□□□□ -1.64
TNRC6B-202ENST00000335727 PLEKHB1Q9UF11 243 aaPredicted RBP4.82□□□□□ -1.64
TNRC6B-202ENST00000335727 TRIP12Q14669 1992 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms