RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 C17orf100A8MU93 164 aa18.25■□□□□ 0.51
TPM1-204ENST00000334895 ADH4P08319 380 aa18.25■□□□□ 0.51
TPM1-204ENST00000334895 ATP1B3P54709 279 aa18.25■□□□□ 0.51
TPM1-204ENST00000334895 DTX2Q86UW9 622 aa18.25■□□□□ 0.51
TPM1-204ENST00000334895 FOXRED1Q96CU9 486 aaPredicted RBP18.25■□□□□ 0.51
TPM1-204ENST00000334895 CXXC4Q9H2H0 198 aa18.25■□□□□ 0.51
TPM1-204ENST00000334895 CLEC4MQ9H2X3 399 aaPredicted RBP18.25■□□□□ 0.51
TPM1-204ENST00000334895 OR51I2Q9H344 312 aa18.25■□□□□ 0.51
TPM1-204ENST00000334895 PLEKHF2Q9H8W4 249 aa18.25■□□□□ 0.51
TPM1-204ENST00000334895 PLGRKTQ9HBL7 147 aa18.25■□□□□ 0.51
TPM1-204ENST00000334895 NOP16Q9Y3C1 178 aaKnown RBP18.25■□□□□ 0.51
TPM1-204ENST00000334895 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.24■□□□□ 0.51
TPM1-204ENST00000334895 CD200P41217 278 aa18.24■□□□□ 0.51
TPM1-204ENST00000334895 ZNF154Q13106 437 aa18.24■□□□□ 0.51
TPM1-204ENST00000334895 IDNKQ5T6J7 187 aa18.24■□□□□ 0.51
TPM1-204ENST00000334895 C1QL2Q7Z5L3 287 aa18.24■□□□□ 0.51
TPM1-204ENST00000334895 SPERTQ8NA61 448 aa18.24■□□□□ 0.51
TPM1-204ENST00000334895 OR6M1Q8NGM8 313 aa18.24■□□□□ 0.51
TPM1-204ENST00000334895 GPER1Q99527 375 aa18.24■□□□□ 0.51
TPM1-204ENST00000334895 NEK6Q9HC98 313 aa18.24■□□□□ 0.51
TPM1-204ENST00000334895 CBLN4Q9NTU7 201 aa18.24■□□□□ 0.51
TPM1-204ENST00000334895 ZDHHC8Q9ULC8 765 aa18.24■□□□□ 0.51
TPM1-204ENST00000334895 CHD3Q12873 2000 aaKnown RBP18.24■□□□□ 0.51
TPM1-204ENST00000334895 PTBP3O95758 552 aaKnown RBP18.23■□□□□ 0.51
TPM1-204ENST00000334895 HTR2CP28335 458 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 HAAOP46952 286 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 P2RY14Q15391 338 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 PRAMEF6Q5VXH4 476 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 CROCCP3Q8IVE0 287 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 SORCS2Q96PQ0 1159 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 OR2V2Q96R30 315 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 TRAF4Q9BUZ4 470 aaPredicted RBP18.23■□□□□ 0.51
TPM1-204ENST00000334895 DYNLRB1Q9NP97 96 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 FAIMQ9NVQ4 179 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 STEAP1Q9UHE8 339 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 SPRY1O43609 319 aaPredicted RBP18.23■□□□□ 0.51
TPM1-204ENST00000334895 PLATP00750 562 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 SOX6P35712 828 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 POU3F4P49335 361 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 SNRPD2P62316 118 aaKnown RBP18.23■□□□□ 0.51
TPM1-204ENST00000334895 RIN1Q13671 783 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 RAB11BQ15907 218 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 DGUOKQ16854 277 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 AGAP6Q5VW22 663 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 C11orf53Q8IXP5 236 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 TNFAIP8L1Q8WVP5 186 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 MEGF10Q96KG7 1140 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 C1orf147Q96MC9 270 aaPredicted RBP18.23■□□□□ 0.51
TPM1-204ENST00000334895 NXF2Q9GZY0 626 aaKnown RBP18.23■□□□□ 0.51
TPM1-204ENST00000334895 KCNK15Q9H427 330 aa18.23■□□□□ 0.51
TPM1-204ENST00000334895 LRP5LA4QPB2 252 aa18.22■□□□□ 0.51
TPM1-204ENST00000334895 TMEM210A6NLX4 147 aa18.22■□□□□ 0.51
TPM1-204ENST00000334895 PAHP00439 452 aa18.22■□□□□ 0.51
TPM1-204ENST00000334895 CD55P08174 381 aa18.22■□□□□ 0.51
TPM1-204ENST00000334895 PTGFRP43088 359 aa18.22■□□□□ 0.51
TPM1-204ENST00000334895 PDZK1IP1Q13113 114 aa18.22■□□□□ 0.51
TPM1-204ENST00000334895 MPPED2Q15777 294 aa18.22■□□□□ 0.51
TPM1-204ENST00000334895 HAGHLQ6PII5 290 aaPredicted RBP18.22■□□□□ 0.51
TPM1-204ENST00000334895 SCCPDHQ8NBX0 429 aa18.22■□□□□ 0.51
TPM1-204ENST00000334895 ITLN1Q8WWA0 313 aa18.22■□□□□ 0.51
TPM1-204ENST00000334895 TLNRD1Q9H1K6 362 aa18.22■□□□□ 0.51
TPM1-204ENST00000334895 LIN7BQ9HAP6 207 aa18.22■□□□□ 0.51
TPM1-204ENST00000334895 C14orf119Q9NWQ9 140 aa18.22■□□□□ 0.51
TPM1-204ENST00000334895 MRPS28Q9Y2Q9 187 aaKnown RBP18.22■□□□□ 0.51
TPM1-204ENST00000334895 UNC79Q9P2D8 2635 aa18.22■□□□□ 0.51
TPM1-204ENST00000334895 IGKV1-12A0A0C4DH73 117 aa18.21■□□□□ 0.51
TPM1-204ENST00000334895 SYNGR1O43759 233 aa18.21■□□□□ 0.51
TPM1-204ENST00000334895 ANGPTL7O43827 346 aa18.21■□□□□ 0.51
TPM1-204ENST00000334895 IGKV1D-12P01611 117 aa18.21■□□□□ 0.51
TPM1-204ENST00000334895 GRPP07492 148 aa18.21■□□□□ 0.51
TPM1-204ENST00000334895 SNRPBP14678 240 aaKnown RBP18.21■□□□□ 0.51
TPM1-204ENST00000334895 TNFAIP6P98066 277 aaPredicted RBP18.21■□□□□ 0.51
TPM1-204ENST00000334895 ZNF573Q86YE8 665 aa18.21■□□□□ 0.51
TPM1-204ENST00000334895 PNLDC1Q8NA58 520 aaKnown RBP18.21■□□□□ 0.51
TPM1-204ENST00000334895 OR51D1Q8NGF3 324 aa18.21■□□□□ 0.51
TPM1-204ENST00000334895 CPNE2Q96FN4 548 aaPredicted RBP18.21■□□□□ 0.51
TPM1-204ENST00000334895 DIRC2Q96SL1 478 aa18.21■□□□□ 0.51
TPM1-204ENST00000334895 MS4A5Q9H3V2 200 aa18.21■□□□□ 0.51
TPM1-204ENST00000334895 NKIRAS2Q9NYR9 191 aa18.21■□□□□ 0.51
TPM1-204ENST00000334895 PTTG2Q9NZH5 202 aa18.21■□□□□ 0.51
TPM1-204ENST00000334895 FBXO9Q9UK97 447 aaPredicted RBP18.21■□□□□ 0.51
TPM1-204ENST00000334895 LAMP3Q9UQV4 416 aa18.21■□□□□ 0.51
TPM1-204ENST00000334895 RHBDL1O75783 438 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 MPZP25189 248 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 RBMXP38159 391 aaKnown RBP18.2■□□□□ 0.5
TPM1-204ENST00000334895 PPOXP50336 477 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 ZNF404Q494X3 552 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 AWAT2Q6E213 333 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 GLIPR1L1Q6UWM5 242 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 ASCL4Q6XD76 172 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 SLC25A26Q70HW3 274 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 CELF2-AS1Q8N7Q2 184 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 OR5H6Q8NGV6 325 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 AQP3Q92482 292 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 FAM3DQ96BQ1 224 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 C14orf79Q96F83 325 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 OR5V1Q9UGF6 321 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 IL19Q9UHD0 177 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 AKAP6Q13023 2319 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 DSCAMO60469 2012 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms