RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 OR5B21A6NL26 309 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 CST2P09228 141 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 NME2P22392 152 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 CD276Q5ZPR3 534 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 TRMT61AQ96FX7 289 aaKnown RBP13.29□□□□□ -0.28
C9orf47-201ENST00000334490 ANGPTL4Q9BY76 406 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 CNTNAP3Q9BZ76 1288 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 MPC1Q9Y5U8 109 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 CDX4O14627 284 aaPredicted RBP13.28□□□□□ -0.28
C9orf47-201ENST00000334490 AKR7A2O43488 359 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 ALDH3B1P43353 468 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 PIGPP57054 158 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 DYRK1AQ13627 763 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 CREB3L2Q70SY1 520 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 OR52N4Q8NGI2 321 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 GPX8Q8TED1 209 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 ASB5Q8WWX0 329 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 RAB1CQ92928 201 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 FAM122AQ96E09 287 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 PIKFYVEQ9Y2I7 2098 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 SPTAN1Q13813 2472 aaKnown RBP13.28□□□□□ -0.28
C9orf47-201ENST00000334490 DFFBO76075 338 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 ZXDCQ2QGD7 858 aaPredicted RBP13.28□□□□□ -0.28
C9orf47-201ENST00000334490 SPANXN5Q5MJ07 72 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 OR13C8Q8NGS7 320 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 SLC35E1Q96K37 410 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 SPSB2Q99619 263 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 RNF32Q9H0A6 362 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 KCNIP2Q9NS61 270 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 ARID2Q68CP9 1835 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 KIF13BQ9NQT8 1826 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 MOB3BQ86TA1 216 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 OR10V1Q8NGI7 309 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 SMIM4Q8WVI0 70 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 ARHGAP5-AS1Q96IT6 56 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 TGM6O95932 706 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 SMIM10L1P0DMW3 83 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 GZMMP51124 257 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 UBE2MP61081 183 aaKnown RBP13.28□□□□□ -0.28
C9orf47-201ENST00000334490 CTF1Q16619 201 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 TSPO2Q5TGU0 170 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 OR4S1Q8NGB4 309 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 SMIM10Q96HG1 83 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 FLVCR2Q9UPI3 526 aa13.28□□□□□ -0.28
C9orf47-201ENST00000334490 ANKRD33BA6NCL7 494 aa13.27□□□□□ -0.28
C9orf47-201ENST00000334490 ACP1P24666 158 aa13.27□□□□□ -0.28
C9orf47-201ENST00000334490 GABRA4P48169 554 aa13.27□□□□□ -0.28
C9orf47-201ENST00000334490 KRTCAP3Q53RY4 240 aa13.27□□□□□ -0.28
C9orf47-201ENST00000334490 OR4C16Q8NGL9 310 aa13.27□□□□□ -0.28
C9orf47-201ENST00000334490 OR14K1Q8NGZ2 314 aa13.27□□□□□ -0.28
C9orf47-201ENST00000334490 FOXJ2Q9P0K8 574 aa13.27□□□□□ -0.28
C9orf47-201ENST00000334490 GDF9O60383 454 aa13.27□□□□□ -0.29
C9orf47-201ENST00000334490 TLE4Q04727 773 aa13.27□□□□□ -0.29
C9orf47-201ENST00000334490 GON7Q9BXV9 100 aa13.27□□□□□ -0.29
C9orf47-201ENST00000334490 CXXC4Q9H2H0 198 aa13.27□□□□□ -0.29
C9orf47-201ENST00000334490 TMEM38BQ9NVV0 291 aa13.27□□□□□ -0.29
C9orf47-201ENST00000334490 SMLR1H3BR10 107 aa13.27□□□□□ -0.29
C9orf47-201ENST00000334490 ADAM20O43506 726 aa13.27□□□□□ -0.29
C9orf47-201ENST00000334490 ZNF528Q3MIS6 628 aa13.27□□□□□ -0.29
C9orf47-201ENST00000334490 OR2W3Q7Z3T1 314 aa13.27□□□□□ -0.29
C9orf47-201ENST00000334490 DRAXINQ8NBI3 349 aaPredicted RBP13.27□□□□□ -0.29
C9orf47-201ENST00000334490 UHRF2Q96PU4 802 aa13.27□□□□□ -0.29
C9orf47-201ENST00000334490 SSX3Q99909 188 aa13.27□□□□□ -0.29
C9orf47-201ENST00000334490 OR2H1Q9GZK4 316 aa13.27□□□□□ -0.29
C9orf47-201ENST00000334490 TO15178 435 aa13.27□□□□□ -0.29
C9orf47-201ENST00000334490 ZFP36L2P47974 494 aaKnown RBP13.27□□□□□ -0.29
C9orf47-201ENST00000334490 APH1BQ8WW43 257 aa13.27□□□□□ -0.29
C9orf47-201ENST00000334490 FBXW5Q969U6 566 aa13.27□□□□□ -0.29
C9orf47-201ENST00000334490 ZNF251Q9BRH9 671 aa13.27□□□□□ -0.29
C9orf47-201ENST00000334490 HIF1ANQ9NWT6 349 aa13.27□□□□□ -0.29
C9orf47-201ENST00000334490 TINAGQ9UJW2 476 aa13.27□□□□□ -0.29
C9orf47-201ENST00000334490 INTS1Q8N201 2190 aaKnown RBP13.26□□□□□ -0.29
C9orf47-201ENST00000334490 FABP1P07148 127 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 ADH4P08319 380 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 PTHLHP12272 177 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 CDCP2Q5VXM1 449 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 LYPD8Q6UX82 237 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 C17orf78Q8N4C9 275 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 OR10AD1Q8NGE0 317 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 NANPQ8TBE9 248 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 CHST6Q9GZX3 395 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 ZNF354AO60765 605 aaPredicted RBP13.26□□□□□ -0.29
C9orf47-201ENST00000334490 HBE1P02100 147 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 COX6A1P12074 109 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 ADRA2CP18825 462 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 CRYBB2P43320 205 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 OR3A4PP47883 348 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 SSX1Q16384 188 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 Q6ZRG5 221 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 TERB2Q8NHR7 220 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 FRZBQ92765 325 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 PINX1Q96BK5 328 aaKnown RBP13.26□□□□□ -0.29
C9orf47-201ENST00000334490 DDOQ99489 341 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 FAAP24Q9BTP7 215 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 LOC101059948A0A1B0GTJ6 334 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 M0R1X1 148 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 ATXN7O15265 892 aaPredicted RBP13.26□□□□□ -0.29
C9orf47-201ENST00000334490 LRP3O75074 770 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 S100A11P31949 105 aa13.26□□□□□ -0.29
C9orf47-201ENST00000334490 ERHP84090 104 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms