RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 MESP1Q9BRJ9 268 aa20.76■□□□□ 0.91
TSKU-201ENST00000333090 DEFB133Q30KQ1 61 aa20.75■□□□□ 0.91
TSKU-201ENST00000333090 DOK3Q7L591 496 aa20.75■□□□□ 0.91
TSKU-201ENST00000333090 LINC00469Q8N7U9 141 aa20.75■□□□□ 0.91
TSKU-201ENST00000333090 BSCL2Q96G97 398 aaPredicted RBP20.75■□□□□ 0.91
TSKU-201ENST00000333090 SEBOXQ9HB31 216 aaPredicted RBP20.75■□□□□ 0.91
TSKU-201ENST00000333090 METTL1Q9UBP6 276 aaKnown RBP20.75■□□□□ 0.91
TSKU-201ENST00000333090 MIOXQ9UGB7 285 aa20.75■□□□□ 0.91
TSKU-201ENST00000333090 MMP17Q9ULZ9 603 aa20.75■□□□□ 0.91
TSKU-201ENST00000333090 C5orf63A6NC05 138 aa20.75■□□□□ 0.91
TSKU-201ENST00000333090 EIF1BO60739 113 aaKnown RBP20.75■□□□□ 0.91
TSKU-201ENST00000333090 IGHG1P01857 330 aa20.75■□□□□ 0.91
TSKU-201ENST00000333090 ARG1P05089 322 aa20.75■□□□□ 0.91
TSKU-201ENST00000333090 NQO2P16083 231 aa20.75■□□□□ 0.91
TSKU-201ENST00000333090 RAB5AP20339 215 aa20.75■□□□□ 0.91
TSKU-201ENST00000333090 EIF1P41567 113 aaKnown RBP20.75■□□□□ 0.91
TSKU-201ENST00000333090 OR2B8PP59922 312 aa20.75■□□□□ 0.91
TSKU-201ENST00000333090 MYBPHQ13203 477 aa20.75■□□□□ 0.91
TSKU-201ENST00000333090 ADAM5Q6NVV9 412 aa20.75■□□□□ 0.91
TSKU-201ENST00000333090 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.75■□□□□ 0.91
TSKU-201ENST00000333090 FAM24BQ8N5W8 94 aa20.75■□□□□ 0.91
TSKU-201ENST00000333090 UBAC2Q8NBM4 344 aa20.75■□□□□ 0.91
TSKU-201ENST00000333090 NOXO1Q8NFA2 376 aa20.75■□□□□ 0.91
TSKU-201ENST00000333090 A0A1W2PPC4 97 aa20.74■□□□□ 0.91
TSKU-201ENST00000333090 C10orf142B7Z368 130 aa20.74■□□□□ 0.91
TSKU-201ENST00000333090 E9PLN8 166 aa20.74■□□□□ 0.91
TSKU-201ENST00000333090 EFNA2O43921 213 aa20.74■□□□□ 0.91
TSKU-201ENST00000333090 DHRS7CA6NNS2 312 aa20.74■□□□□ 0.91
TSKU-201ENST00000333090 PGA4P0DJD7 388 aa20.74■□□□□ 0.91
TSKU-201ENST00000333090 PGA3P0DJD8 388 aa20.74■□□□□ 0.91
TSKU-201ENST00000333090 C6orf201Q7Z4U5 140 aa20.74■□□□□ 0.91
TSKU-201ENST00000333090 PPP1R3BQ86XI6 285 aa20.74■□□□□ 0.91
TSKU-201ENST00000333090 SSC4DQ8WTU2 575 aa20.74■□□□□ 0.91
TSKU-201ENST00000333090 SHDQ96IW2 340 aa20.74■□□□□ 0.91
TSKU-201ENST00000333090 TUBD1Q9UJT1 453 aa20.74■□□□□ 0.91
TSKU-201ENST00000333090 UNC13CQ8NB66 2214 aa20.73■□□□□ 0.91
TSKU-201ENST00000333090 C1QL1O75973 258 aa20.73■□□□□ 0.91
TSKU-201ENST00000333090 TCEAL7Q9BRU2 100 aa20.73■□□□□ 0.91
TSKU-201ENST00000333090 HDHD3Q9BSH5 251 aaPredicted RBP20.73■□□□□ 0.91
TSKU-201ENST00000333090 MCTS1Q9ULC4 181 aaKnown RBP20.73■□□□□ 0.91
TSKU-201ENST00000333090 SERPINE3A8MV23 424 aa20.73■□□□□ 0.91
TSKU-201ENST00000333090 C2CD4DB7Z1M9 353 aa20.73■□□□□ 0.91
TSKU-201ENST00000333090 CAMLGP49069 296 aa20.73■□□□□ 0.91
TSKU-201ENST00000333090 OR14K1Q8NGZ2 314 aa20.73■□□□□ 0.91
TSKU-201ENST00000333090 S100A13Q99584 98 aa20.73■□□□□ 0.91
TSKU-201ENST00000333090 MED19A0JLT2 244 aaPredicted RBP20.72■□□□□ 0.91
TSKU-201ENST00000333090 FOXI3A8MTJ6 420 aaPredicted RBP20.72■□□□□ 0.91
TSKU-201ENST00000333090 UMAD1C9J7I0 102 aa20.72■□□□□ 0.91
TSKU-201ENST00000333090 NSUN5P2Q63ZY6 315 aa20.72■□□□□ 0.91
TSKU-201ENST00000333090 CD300LFQ8TDQ1 290 aa20.72■□□□□ 0.91
TSKU-201ENST00000333090 TAAR9Q96RI9 348 aa20.72■□□□□ 0.91
TSKU-201ENST00000333090 UCK1Q9HA47 277 aa20.72■□□□□ 0.91
TSKU-201ENST00000333090 PNRC2Q9NPJ4 139 aaKnown RBP20.72■□□□□ 0.91
TSKU-201ENST00000333090 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.72■□□□□ 0.91
TSKU-201ENST00000333090 A0A1B0GV50 99 aa20.72■□□□□ 0.91
TSKU-201ENST00000333090 A0A1W2PNV4 684 aa20.72■□□□□ 0.91
TSKU-201ENST00000333090 PRH1P02810 166 aa20.72■□□□□ 0.91
TSKU-201ENST00000333090 CCL1P22362 96 aa20.72■□□□□ 0.91
TSKU-201ENST00000333090 GABRR1P24046 479 aa20.72■□□□□ 0.91
TSKU-201ENST00000333090 ZNF84P51523 738 aa20.72■□□□□ 0.91
TSKU-201ENST00000333090 TUBA4BQ9H853 241 aa20.72■□□□□ 0.91
TSKU-201ENST00000333090 COL5A1P20908 1838 aaPredicted RBP20.71■□□□□ 0.91
TSKU-201ENST00000333090 OR8U8P0C7N1 319 aa20.71■□□□□ 0.91
TSKU-201ENST00000333090 DANCRP0C864 163 aa20.71■□□□□ 0.91
TSKU-201ENST00000333090 FOSL2P15408 326 aa20.71■□□□□ 0.91
TSKU-201ENST00000333090 SP6Q3SY56 376 aa20.71■□□□□ 0.91
TSKU-201ENST00000333090 SCRT1Q9BWW7 348 aa20.71■□□□□ 0.91
TSKU-201ENST00000333090 OR51M1Q9H341 326 aa20.71■□□□□ 0.91
TSKU-201ENST00000333090 PLEKHA2Q9HB19 425 aa20.71■□□□□ 0.91
TSKU-201ENST00000333090 LUZP4Q9P127 313 aa20.71■□□□□ 0.91
TSKU-201ENST00000333090 PISDQ9UG56 409 aa20.71■□□□□ 0.91
TSKU-201ENST00000333090 A0A1W2PNR3 127 aa20.71■□□□□ 0.91
TSKU-201ENST00000333090 A0A1W2PPE2 198 aa20.71■□□□□ 0.91
TSKU-201ENST00000333090 XRCC2O43543 280 aa20.71■□□□□ 0.91
TSKU-201ENST00000333090 SULT1A1P50225 295 aa20.71■□□□□ 0.91
TSKU-201ENST00000333090 CRIP3Q6Q6R5 217 aa20.71■□□□□ 0.91
TSKU-201ENST00000333090 PGAM5Q96HS1 289 aa20.71■□□□□ 0.91
TSKU-201ENST00000333090 CHRNA10Q9GZZ6 450 aa20.71■□□□□ 0.91
TSKU-201ENST00000333090 KLRF1Q9NZS2 232 aa20.71■□□□□ 0.91
TSKU-201ENST00000333090 PADI1Q9ULC6 663 aa20.71■□□□□ 0.91
TSKU-201ENST00000333090 FBXO7Q9Y3I1 522 aa20.71■□□□□ 0.91
TSKU-201ENST00000333090 FER1L5A0AVI2 2057 aa20.71■□□□□ 0.91
TSKU-201ENST00000333090 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.7■□□□□ 0.9
TSKU-201ENST00000333090 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.7■□□□□ 0.9
TSKU-201ENST00000333090 CRYM-AS1A6NIL9 109 aa20.7■□□□□ 0.9
TSKU-201ENST00000333090 RHPN2P1A8MT19 583 aa20.7■□□□□ 0.9
TSKU-201ENST00000333090 CLN5O75503 358 aa20.7■□□□□ 0.9
TSKU-201ENST00000333090 ZNF205O95201 554 aa20.7■□□□□ 0.9
TSKU-201ENST00000333090 DIRAS3O95661 229 aa20.7■□□□□ 0.9
TSKU-201ENST00000333090 IGHV2-5P01817 119 aa20.7■□□□□ 0.9
TSKU-201ENST00000333090 MBPP02686 304 aaPredicted RBP20.7■□□□□ 0.9
TSKU-201ENST00000333090 FCGR2AP12318 317 aa20.7■□□□□ 0.9
TSKU-201ENST00000333090 FOLR1P15328 257 aa20.7■□□□□ 0.9
TSKU-201ENST00000333090 SLC39A7Q92504 469 aa20.7■□□□□ 0.9
TSKU-201ENST00000333090 TOMM40LQ969M1 308 aa20.7■□□□□ 0.9
TSKU-201ENST00000333090 PLEKHJ1Q9NW61 149 aa20.7■□□□□ 0.9
TSKU-201ENST00000333090 MUC3AQ02505 3323 aa20.7■□□□□ 0.9
TSKU-201ENST00000333090 RALGAPA1Q6GYQ0 2036 aa20.7■□□□□ 0.9
TSKU-201ENST00000333090 CTSDP07339 412 aaPredicted RBP20.7■□□□□ 0.9
TSKU-201ENST00000333090 CSNK1EP49674 416 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms