RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 PECRQ9BY49 303 aa15.24■□□□□ 0.03
PTP4A3-201ENST00000329397 MMP26Q9NRE1 261 aa15.24■□□□□ 0.03
PTP4A3-201ENST00000329397 HOXA1P49639 335 aaPredicted RBP15.23■□□□□ 0.03
PTP4A3-201ENST00000329397 SUMO3P55854 103 aaPredicted RBP15.23■□□□□ 0.03
PTP4A3-201ENST00000329397 IAH1Q2TAA2 248 aaPredicted RBP15.23■□□□□ 0.03
PTP4A3-201ENST00000329397 SP6Q3SY56 376 aa15.23■□□□□ 0.03
PTP4A3-201ENST00000329397 DOK3Q7L591 496 aa15.23■□□□□ 0.03
PTP4A3-201ENST00000329397 OR2M3Q8NG83 312 aa15.23■□□□□ 0.03
PTP4A3-201ENST00000329397 OR2AE1Q8NHA4 323 aa15.23■□□□□ 0.03
PTP4A3-201ENST00000329397 ZNF385AQ96PM9 386 aaKnown RBP15.23■□□□□ 0.03
PTP4A3-201ENST00000329397 UCN2Q96RP3 112 aa15.23■□□□□ 0.03
PTP4A3-201ENST00000329397 ESRP2Q9H6T0 727 aaKnown RBP15.23■□□□□ 0.03
PTP4A3-201ENST00000329397 ANAPC10Q9UM13 185 aa15.23■□□□□ 0.03
PTP4A3-201ENST00000329397 MED19A0JLT2 244 aaPredicted RBP15.23■□□□□ 0.03
PTP4A3-201ENST00000329397 MSTNO14793 375 aa15.23■□□□□ 0.03
PTP4A3-201ENST00000329397 FABP1P07148 127 aa15.23■□□□□ 0.03
PTP4A3-201ENST00000329397 PJVKQ0ZLH3 352 aa15.23■□□□□ 0.03
PTP4A3-201ENST00000329397 C2orf50Q96LR7 162 aa15.23■□□□□ 0.03
PTP4A3-201ENST00000329397 MOB1AQ9H8S9 216 aa15.23■□□□□ 0.03
PTP4A3-201ENST00000329397 TAF9BQ9HBM6 251 aa15.23■□□□□ 0.03
PTP4A3-201ENST00000329397 LSM5Q9Y4Y9 91 aaKnown RBP15.23■□□□□ 0.03
PTP4A3-201ENST00000329397 URB1O60287 2271 aaKnown RBP15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 FAM221AA4D161 298 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 EDN3P14138 238 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 CD80P33681 288 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 OPRM1P35372 400 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 KCNJ3P48549 501 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 RPP30P78346 268 aaKnown RBP15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 TSPO2Q5TGU0 170 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 GUSBP11Q6P575 273 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 Q7L0L9 218 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 BATF2Q8N1L9 274 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 OR5T2Q8NGG2 359 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 ADAMTS17Q8TE56 1095 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 NRIP2Q9BQI9 281 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 ZNF2Q9BSG1 426 aaPredicted RBP15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 NDRG3Q9UGV2 375 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 PIGLQ9Y2B2 252 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 SPP1P10451 314 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 PNLIPRP3Q17RR3 467 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 SPAG16Q8N0X2 631 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 OR6X1Q8NH79 312 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 TOMM40LQ969M1 308 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 JSRP1Q96MG2 331 aaPredicted RBP15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 AQP10Q96PS8 301 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 RASL10BQ96S79 203 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 RBM24Q9BX46 236 aaKnown RBP15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 LIME1Q9H400 295 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 FAM186AA6NE01 2351 aa15.22■□□□□ 0.03
PTP4A3-201ENST00000329397 TRBV23-1A0A0A0MS06 115 aa15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 ZNF708P17019 499 aa15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 NAAAQ02083 359 aa15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 CPEB2Q7Z5Q1 589 aaKnown RBP15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 SEMA6DQ8NFY4 1073 aa15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 RXFP4Q8TDU9 374 aa15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 SSC4DQ8WTU2 575 aa15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 BSCL2Q96G97 398 aaPredicted RBP15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 OXGR1Q96P68 337 aa15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 GNRHR2Q96P88 292 aa15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 TGIF2Q9GZN2 237 aa15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 GPR173Q9NS66 373 aa15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 SPRY1O43609 319 aaPredicted RBP15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 CRYBA1P05813 215 aa15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 SFTA3P0C7M3 94 aa15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 HKR1P10072 659 aa15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 PDZK1IP1Q13113 114 aa15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 PDCD1Q15116 288 aa15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 SNAI3Q3KNW1 292 aa15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 MRPL24Q96A35 216 aaKnown RBP15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 NUDT16L1Q9BRJ7 211 aaKnown RBP15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 COA4Q9NYJ1 87 aa15.21■□□□□ 0.03
PTP4A3-201ENST00000329397 CEACAM18A8MTB9 384 aa15.2■□□□□ 0.02
PTP4A3-201ENST00000329397 TGIF1Q15583 401 aa15.2■□□□□ 0.02
PTP4A3-201ENST00000329397 TAF9Q16594 264 aa15.2■□□□□ 0.02
PTP4A3-201ENST00000329397 RSPO1Q2MKA7 263 aaPredicted RBP15.2■□□□□ 0.02
PTP4A3-201ENST00000329397 ACTBL2Q562R1 376 aa15.2■□□□□ 0.02
PTP4A3-201ENST00000329397 SLC39A7Q92504 469 aa15.2■□□□□ 0.02
PTP4A3-201ENST00000329397 NECAB3Q96P71 396 aaPredicted RBP15.2■□□□□ 0.02
PTP4A3-201ENST00000329397 S100A13Q99584 98 aa15.2■□□□□ 0.02
PTP4A3-201ENST00000329397 FBXL17Q9UF56 701 aa15.2■□□□□ 0.02
PTP4A3-201ENST00000329397 CARHSP1Q9Y2V2 147 aaKnown RBP15.2■□□□□ 0.02
PTP4A3-201ENST00000329397 OR8U9P0C7N5 309 aa15.2■□□□□ 0.02
PTP4A3-201ENST00000329397 RAB11FIP2Q7L804 512 aa15.2■□□□□ 0.02
PTP4A3-201ENST00000329397 OR8U1Q8NH10 309 aa15.2■□□□□ 0.02
PTP4A3-201ENST00000329397 SPSB2Q99619 263 aa15.2■□□□□ 0.02
PTP4A3-201ENST00000329397 PLEKHJ1Q9NW61 149 aa15.2■□□□□ 0.02
PTP4A3-201ENST00000329397 RCC2Q9P258 522 aaKnown RBP15.2■□□□□ 0.02
PTP4A3-201ENST00000329397 A0A1B0GV50 99 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 BCAT2O15382 392 aaPredicted RBP15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 ZFAND5O76080 213 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 H2AFB1P0C5Y9 115 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 SRFP11831 508 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 CCL1P22362 96 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 MEOX2P50222 304 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 DHRS7BQ6IAN0 325 aaPredicted RBP15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 FAM89BQ8N5H3 189 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 SHDQ96IW2 340 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 FAAP24Q9BTP7 215 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 DEFB126Q9BYW3 111 aa15.19■□□□□ 0.02
PTP4A3-201ENST00000329397 C14orf166Q9Y224 244 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms