RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 UNKLQ9H9P5 680 aaKnown RBP11.25□□□□□ -0.61
CCDC60-201ENST00000327554 FAM60AQ9NP50 221 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.25□□□□□ -0.61
CCDC60-201ENST00000327554 MRPS23Q9Y3D9 190 aaKnown RBP11.25□□□□□ -0.61
CCDC60-201ENST00000327554 IGKV1D-8A0A087WSZ0 117 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 A0A0J9YY10 115 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 FOXI3A8MTJ6 420 aaPredicted RBP11.25□□□□□ -0.61
CCDC60-201ENST00000327554 C9J4A7 227 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 PHOX2AO14813 284 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 SLC31A1O15431 190 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 NPIPB7O75200 414 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 CRTAPO75718 401 aaPredicted RBP11.25□□□□□ -0.61
CCDC60-201ENST00000327554 HOXA6P31267 233 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 SLC6A8P48029 635 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 NUTF2P61970 127 aaKnown RBP11.25□□□□□ -0.61
CCDC60-201ENST00000327554 NHLH2Q02577 135 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 RELQ04864 619 aaPredicted RBP11.25□□□□□ -0.61
CCDC60-201ENST00000327554 OR8G1Q15617 311 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 ZNF429Q86V71 674 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 ABHD14AQ9BUJ0 271 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 NXF5Q9H1B4 397 aaKnown RBP11.25□□□□□ -0.61
CCDC60-201ENST00000327554 KCNIP3Q9Y2W7 256 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 RFNGQ9Y644 331 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 MKI67P46013 3256 aaKnown RBP11.24□□□□□ -0.61
CCDC60-201ENST00000327554 HCRTR2O43614 444 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 DIRAS3O95661 229 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 ADH1BP00325 375 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 CTSDP07339 412 aaPredicted RBP11.24□□□□□ -0.61
CCDC60-201ENST00000327554 QDPRP09417 244 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 COX5BP10606 129 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 C5orf24Q7Z6I8 188 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 SULF2Q8IWU5 870 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 FAM89BQ8N5H3 189 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 ZNF321PQ8N8H1 164 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 DAZLQ92904 295 aaKnown RBP11.24□□□□□ -0.61
CCDC60-201ENST00000327554 TSACCQ96A04 125 aaPredicted RBP11.24□□□□□ -0.61
CCDC60-201ENST00000327554 SHDQ96IW2 340 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 CRLF2Q9HC73 371 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 FAM86C1Q9NVL1 165 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 FOXD3Q9UJU5 478 aaPredicted RBP11.24□□□□□ -0.61
CCDC60-201ENST00000327554 WASF3Q9UPY6 502 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 HPNP05981 417 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 OR5H8P0DN80 308 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 ZNF20P17024 532 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 CHRFAM7AQ494W8 412 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 SP5Q6BEB4 398 aaPredicted RBP11.24□□□□□ -0.61
CCDC60-201ENST00000327554 DPPA2Q7Z7J5 298 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 OR10S1Q8NGN2 331 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 OR14K1Q8NGZ2 314 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 OR14C36Q8NHC7 312 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 SNIP1Q8TAD8 396 aaKnown RBP11.24□□□□□ -0.61
CCDC60-201ENST00000327554 OR51E1Q8TCB6 317 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 PATE1Q8WXA2 126 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 SLAMF6Q96DU3 332 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 TVP23CQ96ET8 276 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 NDUFAF3Q9BU61 184 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 OR10A2Q9H208 303 aa11.24□□□□□ -0.61
CCDC60-201ENST00000327554 SMCO3A2RU48 225 aa11.23□□□□□ -0.61
CCDC60-201ENST00000327554 CEBPGP53567 150 aa11.23□□□□□ -0.61
CCDC60-201ENST00000327554 ICAM4Q14773 271 aa11.23□□□□□ -0.61
CCDC60-201ENST00000327554 JOSD1Q15040 202 aaPredicted RBP11.23□□□□□ -0.61
CCDC60-201ENST00000327554 TMEM176BQ3YBM2 270 aaPredicted RBP11.23□□□□□ -0.61
CCDC60-201ENST00000327554 TCEAL6Q6IPX3 200 aa11.23□□□□□ -0.61
CCDC60-201ENST00000327554 CYB561D1Q8N8Q1 229 aa11.23□□□□□ -0.61
CCDC60-201ENST00000327554 MRPL43Q8N983 215 aaKnown RBP11.23□□□□□ -0.61
CCDC60-201ENST00000327554 OR6X1Q8NH79 312 aa11.23□□□□□ -0.61
CCDC60-201ENST00000327554 RCC1LQ96I51 464 aaKnown RBP11.23□□□□□ -0.61
CCDC60-201ENST00000327554 ADOQ96SZ5 270 aa11.23□□□□□ -0.61
CCDC60-201ENST00000327554 ZNF2Q9BSG1 426 aaPredicted RBP11.23□□□□□ -0.61
CCDC60-201ENST00000327554 URM1Q9BTM9 101 aaKnown RBP11.23□□□□□ -0.61
CCDC60-201ENST00000327554 PPP1R14DQ9NXH3 145 aa11.23□□□□□ -0.61
CCDC60-201ENST00000327554 KIAA1456Q9P272 454 aa11.23□□□□□ -0.61
CCDC60-201ENST00000327554 CDRT15L2A8MXV6 281 aa11.23□□□□□ -0.61
CCDC60-201ENST00000327554 GPM6BQ13491 265 aa11.23□□□□□ -0.61
CCDC60-201ENST00000327554 USF2Q15853 346 aaPredicted RBP11.23□□□□□ -0.61
CCDC60-201ENST00000327554 AKR1C8PQ5T2L2 129 aa11.23□□□□□ -0.61
CCDC60-201ENST00000327554 SLC22A25Q6T423 547 aa11.23□□□□□ -0.61
CCDC60-201ENST00000327554 PRR22Q8IZ63 422 aa11.23□□□□□ -0.61
CCDC60-201ENST00000327554 ZNF664Q8N3J9 261 aa11.23□□□□□ -0.61
CCDC60-201ENST00000327554 OR8G5Q8NG78 346 aa11.23□□□□□ -0.61
CCDC60-201ENST00000327554 CA5BP1Q8WTZ4 195 aa11.23□□□□□ -0.61
CCDC60-201ENST00000327554 RAB24Q969Q5 203 aa11.23□□□□□ -0.61
CCDC60-201ENST00000327554 HRASLS2Q9NWW9 162 aa11.23□□□□□ -0.61
CCDC60-201ENST00000327554 LIPGQ9Y5X9 500 aa11.23□□□□□ -0.61
CCDC60-201ENST00000327554 CCDC187A0A096LP49 1063 aa11.22□□□□□ -0.61
CCDC60-201ENST00000327554 TMED7-TICAM2A0A0A6YYA0 188 aa11.22□□□□□ -0.61
CCDC60-201ENST00000327554 NSG1A0A0A6YYJ2 146 aa11.22□□□□□ -0.61
CCDC60-201ENST00000327554 FTCDNL1E5RQL4 147 aa11.22□□□□□ -0.61
CCDC60-201ENST00000327554 CLDN4O14493 209 aa11.22□□□□□ -0.61
CCDC60-201ENST00000327554 SCAF4O95104 1147 aaKnown RBP11.22□□□□□ -0.61
CCDC60-201ENST00000327554 GZMBP10144 247 aa11.22□□□□□ -0.61
CCDC60-201ENST00000327554 SFTPCP11686 197 aa11.22□□□□□ -0.61
CCDC60-201ENST00000327554 IL11P20809 199 aa11.22□□□□□ -0.61
CCDC60-201ENST00000327554 FGF7P21781 194 aa11.22□□□□□ -0.61
CCDC60-201ENST00000327554 ECI1P42126 302 aa11.22□□□□□ -0.61
CCDC60-201ENST00000327554 KLHL24Q6TFL4 600 aa11.22□□□□□ -0.61
CCDC60-201ENST00000327554 BEND2Q8NDZ0 799 aa11.22□□□□□ -0.61
CCDC60-201ENST00000327554 SSC4DQ8WTU2 575 aa11.22□□□□□ -0.61
CCDC60-201ENST00000327554 ASB10Q8WXI3 467 aa11.22□□□□□ -0.61
CCDC60-201ENST00000327554 FAM210BQ96KR6 192 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms