RNA–Protein interactions for RNA: ENST00000325599.12

SHQ1-201, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHQ1, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-201ENST00000325599 RIPPLY1Q0D2K3 151 aa14.34□□□□□ -0.11
SHQ1-201ENST00000325599 FAHD2BQ6P2I3 314 aaPredicted RBP14.34□□□□□ -0.11
SHQ1-201ENST00000325599 ACOT7LQ6ZUV0 252 aa14.34□□□□□ -0.11
SHQ1-201ENST00000325599 TMEM123Q8N131 208 aa14.34□□□□□ -0.11
SHQ1-201ENST00000325599 OR56B1Q8NGI3 324 aa14.34□□□□□ -0.11
SHQ1-201ENST00000325599 THAP6Q8TBB0 222 aa14.34□□□□□ -0.11
SHQ1-201ENST00000325599 FAHD2AQ96GK7 314 aa14.34□□□□□ -0.11
SHQ1-201ENST00000325599 SRXN1Q9BYN0 137 aa14.34□□□□□ -0.11
SHQ1-201ENST00000325599 RASL12Q9NYN1 266 aa14.34□□□□□ -0.11
SHQ1-201ENST00000325599 NXT1Q9UKK6 140 aaKnown RBP14.34□□□□□ -0.11
SHQ1-201ENST00000325599 A0A0G2JMM0 328 aa14.33□□□□□ -0.11
SHQ1-201ENST00000325599 A0A1W2PPB8 328 aa14.33□□□□□ -0.11
SHQ1-201ENST00000325599 A0A1W2PRS3 328 aa14.33□□□□□ -0.11
SHQ1-201ENST00000325599 DBX1A6NMT0 343 aa14.33□□□□□ -0.11
SHQ1-201ENST00000325599 KIR3DP1A8MWS1 328 aa14.33□□□□□ -0.11
SHQ1-201ENST00000325599 DHHO43323 396 aa14.33□□□□□ -0.11
SHQ1-201ENST00000325599 BCL2L11O43521 198 aa14.33□□□□□ -0.11
SHQ1-201ENST00000325599 OR2F2O95006 317 aa14.33□□□□□ -0.11
SHQ1-201ENST00000325599 IGLV3-1P01715 115 aa14.33□□□□□ -0.11
SHQ1-201ENST00000325599 S100A8P05109 93 aa14.33□□□□□ -0.11
SHQ1-201ENST00000325599 CTSSP25774 331 aa14.33□□□□□ -0.11
SHQ1-201ENST00000325599 DEFA6Q01524 100 aa14.33□□□□□ -0.11
SHQ1-201ENST00000325599 OR2F1Q13607 317 aa14.33□□□□□ -0.11
SHQ1-201ENST00000325599 ZNF345Q14585 488 aa14.33□□□□□ -0.11
SHQ1-201ENST00000325599 UNQ6126/PRO20091Q6UXV3 157 aa14.33□□□□□ -0.11
SHQ1-201ENST00000325599 ELL3Q9HB65 397 aaPredicted RBP14.33□□□□□ -0.11
SHQ1-201ENST00000325599 ANAPC10Q9UM13 185 aa14.33□□□□□ -0.11
SHQ1-201ENST00000325599 GPR132Q9UNW8 380 aa14.33□□□□□ -0.11
SHQ1-201ENST00000325599 PIGLQ9Y2B2 252 aa14.33□□□□□ -0.11
SHQ1-201ENST00000325599 A0A087WZY1 265 aa14.33□□□□□ -0.12
SHQ1-201ENST00000325599 ADAP1O75689 374 aa14.33□□□□□ -0.12
SHQ1-201ENST00000325599 FCGR2AP12318 317 aa14.33□□□□□ -0.12
SHQ1-201ENST00000325599 FKBP2P26885 142 aaKnown RBP14.33□□□□□ -0.12
SHQ1-201ENST00000325599 BLVRBP30043 206 aaPredicted RBP14.33□□□□□ -0.12
SHQ1-201ENST00000325599 DSCR4P56555 118 aaPredicted RBP14.33□□□□□ -0.12
SHQ1-201ENST00000325599 ECH1Q13011 328 aa14.33□□□□□ -0.12
SHQ1-201ENST00000325599 SMCO1Q147U7 214 aa14.33□□□□□ -0.12
SHQ1-201ENST00000325599 SNAI3Q3KNW1 292 aa14.33□□□□□ -0.12
SHQ1-201ENST00000325599 C10orf128Q5T292 105 aa14.33□□□□□ -0.12
SHQ1-201ENST00000325599 RPS19BP1Q86WX3 136 aaKnown RBP14.33□□□□□ -0.12
SHQ1-201ENST00000325599 PAQR8Q8TEZ7 354 aa14.33□□□□□ -0.12
SHQ1-201ENST00000325599 URM1Q9BTM9 101 aaKnown RBP14.33□□□□□ -0.12
SHQ1-201ENST00000325599 UFSP2Q9NUQ7 469 aa14.33□□□□□ -0.12
SHQ1-201ENST00000325599 PLEK2Q9NYT0 353 aa14.33□□□□□ -0.12
SHQ1-201ENST00000325599 AMY2BP19961 511 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 NTF4P34130 210 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 AGBL5Q8NDL9 886 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 BHLHE23Q8NDY6 225 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 TMEM185AQ8NFB2 350 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 GTF3AQ92664 365 aaKnown RBP14.32□□□□□ -0.12
SHQ1-201ENST00000325599 RHOVQ96L33 236 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 OCSTAMPQ9BR26 566 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 SLC25A32Q9H2D1 315 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 DHRS3O75911 302 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 FBP1P09467 338 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 RPS18P62269 152 aaKnown RBP14.32□□□□□ -0.12
SHQ1-201ENST00000325599 EXT1Q16394 746 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 TMEM128Q5BJH2 165 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 VAX1Q5SQQ9 334 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 SSX9Q7RTT3 188 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 FAM89BQ8N5H3 189 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 PNLDC1Q8NA58 520 aaKnown RBP14.32□□□□□ -0.12
SHQ1-201ENST00000325599 OR5H2Q8NGV7 314 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 OR13G1Q8NGZ3 307 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 SH2D2AQ9NP31 389 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 CRHP06850 196 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 CLEC18BQ6UXF7 455 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 Q7L0L9 218 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 YRDCQ86U90 279 aaKnown RBP14.32□□□□□ -0.12
SHQ1-201ENST00000325599 OR2AE1Q8NHA4 323 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 RTBDNQ9BSG5 229 aaPredicted RBP14.32□□□□□ -0.12
SHQ1-201ENST00000325599 ULBP2Q9BZM5 246 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 BARX1Q9HBU1 254 aaPredicted RBP14.32□□□□□ -0.12
SHQ1-201ENST00000325599 CHMP1AQ9HD42 196 aaPredicted RBP14.32□□□□□ -0.12
SHQ1-201ENST00000325599 CSAG2Q9Y5P2 127 aa14.32□□□□□ -0.12
SHQ1-201ENST00000325599 ZDBF2Q9HCK1 2354 aa14.31□□□□□ -0.12
SHQ1-201ENST00000325599 NSG1A0A0A6YYJ2 146 aa14.31□□□□□ -0.12
SHQ1-201ENST00000325599 MEX3AA1L020 520 aaKnown RBP14.31□□□□□ -0.12
SHQ1-201ENST00000325599 C9J4A7 227 aa14.31□□□□□ -0.12
SHQ1-201ENST00000325599 F5H0A9 414 aaPredicted RBP14.31□□□□□ -0.12
SHQ1-201ENST00000325599 M0R135 149 aa14.31□□□□□ -0.12
SHQ1-201ENST00000325599 HPNP05981 417 aa14.31□□□□□ -0.12
SHQ1-201ENST00000325599 PGAM2P15259 253 aa14.31□□□□□ -0.12
SHQ1-201ENST00000325599 PSMB6P28072 239 aa14.31□□□□□ -0.12
SHQ1-201ENST00000325599 SNU13P55769 128 aaKnown RBP14.31□□□□□ -0.12
SHQ1-201ENST00000325599 SUPT4H1P63272 117 aaKnown RBP14.31□□□□□ -0.12
SHQ1-201ENST00000325599 AADACL3Q5VUY0 350 aa14.31□□□□□ -0.12
SHQ1-201ENST00000325599 OR2Y1Q8NGV0 311 aa14.31□□□□□ -0.12
SHQ1-201ENST00000325599 ZNF799Q96GE5 643 aa14.31□□□□□ -0.12
SHQ1-201ENST00000325599 FOXD3Q9UJU5 478 aaPredicted RBP14.31□□□□□ -0.12
SHQ1-201ENST00000325599 V9GYS6 101 aa14.31□□□□□ -0.12
SHQ1-201ENST00000325599 PATE4P0C8F1 98 aa14.31□□□□□ -0.12
SHQ1-201ENST00000325599 NDUFB7P17568 137 aa14.31□□□□□ -0.12
SHQ1-201ENST00000325599 GLRA1P23415 457 aa14.31□□□□□ -0.12
SHQ1-201ENST00000325599 CSNK2A1P68400 391 aaPredicted RBP14.31□□□□□ -0.12
SHQ1-201ENST00000325599 PDZK1IP1Q13113 114 aa14.31□□□□□ -0.12
SHQ1-201ENST00000325599 PNLIPRP3Q17RR3 467 aa14.31□□□□□ -0.12
SHQ1-201ENST00000325599 TMEM17Q86X19 198 aa14.31□□□□□ -0.12
SHQ1-201ENST00000325599 SPAG16Q8N0X2 631 aa14.31□□□□□ -0.12
SHQ1-201ENST00000325599 INO80EQ8NBZ0 244 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms