RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 ZNF574Q6ZN55 896 aaPredicted RBP11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 Q7L0L9 218 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 RABEPKQ7Z6M1 372 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 EIF4E3Q8N5X7 224 aaKnown RBP11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 OR2M3Q8NG83 312 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 OR14L1PQ8NHC6 308 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 SPTSSAQ969W0 71 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 MRPL24Q96A35 216 aaKnown RBP11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 NMES1Q9C002 83 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 CHRDQ9H2X0 955 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 PARPBPQ9NWS1 579 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 OCIAD1Q9NX40 245 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 FBXL17Q9UF56 701 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 PADI1Q9ULC6 663 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 IGKV1D-8A0A087WSZ0 117 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 GLULP15104 373 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 FOSL2P15408 326 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 CBX5P45973 191 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 HTR5AP47898 357 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 CAMLGP49069 296 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 PJVKQ0ZLH3 352 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 ECH1Q13011 328 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 PEA15Q15121 130 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 OR6X1Q8NH79 312 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 ZNF837Q96EG3 531 aaPredicted RBP11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 MRPL13Q9BYD1 178 aaKnown RBP11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 BCL2L14Q9BZR8 327 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 FAM117AQ9C073 453 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 BARX1Q9HBU1 254 aaPredicted RBP11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 DHRS7CA6NNS2 312 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 DHHO43323 396 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 SFTA3P0C7M3 94 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 CAV2P51636 162 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 QRFPP83859 136 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 ETV3LQ6ZN32 361 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 ESX1Q8N693 406 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 EMG1Q92979 244 aaKnown RBP11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 C14orf79Q96F83 325 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 PHF7Q9BWX1 381 aaPredicted RBP11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 MTCH2Q9Y6C9 303 aa11.32□□□□□ -0.6
HMGCS1-201ENST00000325110 RAB19A4D1S5 217 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 CCL3P10147 92 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 ADCYAP1P18509 176 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 PTGER4P35408 488 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 KCNJ3P48549 501 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 HERV-K104P61576 105 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 CLINT1Q14677 625 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 PIGQQ9BRB3 760 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 RAB33BQ9H082 229 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 ZNF700Q9H0M5 742 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 LPAR3Q9UBY5 353 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 MFNGO00587 321 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 NR2C1P13056 603 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 DAOP14920 347 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 LPAR6P43657 344 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 C17orf82Q86X59 251 aaPredicted RBP11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 NFAM1Q8NET5 270 aaPredicted RBP11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 CADM4Q8NFZ8 388 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 OR14K1Q8NGZ2 314 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 RTBDNQ9BSG5 229 aaPredicted RBP11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 RGCCQ9H4X1 137 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 ZNF581Q9P0T4 197 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 MCTS1Q9ULC4 181 aaKnown RBP11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 DNAJC13O75165 2243 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 CELSR3Q9NYQ7 3312 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 C9J4A7 227 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 TNFSF12O43508 249 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 DHRS3O75911 302 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 C1QL1O75973 258 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 OTX2P32243 289 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 CXCL12P48061 93 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 SUPT4H1P63272 117 aaKnown RBP11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 SRYQ05066 204 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 GGNBP1Q5YKI7 109 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 ZNF774Q6NX45 483 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 SLC25A47Q6Q0C1 308 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 UQCC3Q6UW78 93 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 OR4A4PQ8NGN8 299 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 SECTM1Q8WVN6 248 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 SLAMF9Q96A28 289 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 C12orf57Q99622 126 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 MMP26Q9NRE1 261 aa11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 FBXO9Q9UK97 447 aaPredicted RBP11.31□□□□□ -0.6
HMGCS1-201ENST00000325110 A0A1W2PQM1 296 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 RNASEK-C17orf49H0YIS7 233 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 SGCEO43556 437 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 ZNF728P0DKX0 622 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 CFPP27918 469 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 TMEM33P57088 247 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 PNLIPRP3Q17RR3 467 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 SNAI3Q3KNW1 292 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 PHYHD1Q5SRE7 291 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 SLC22A25Q6T423 547 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 FBXW12Q6X9E4 464 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 METTL9Q9H1A3 318 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 SLC26A1Q9H2B4 701 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 NELFAQ9H3P2 528 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 FRYLO94915 3013 aa11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 PHF1O43189 567 aaPredicted RBP11.3□□□□□ -0.6
HMGCS1-201ENST00000325110 VAX1Q5SQQ9 334 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms