RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 PTGDSP41222 190 aa15.11■□□□□ 0.01
SCAMP4-201ENST00000316097 TSPAN7P41732 249 aa15.11■□□□□ 0.01
SCAMP4-201ENST00000316097 RNF144BQ7Z419 303 aa15.11■□□□□ 0.01
SCAMP4-201ENST00000316097 ANGPTL5Q86XS5 388 aa15.11■□□□□ 0.01
SCAMP4-201ENST00000316097 ARL5BQ96KC2 179 aa15.11■□□□□ 0.01
SCAMP4-201ENST00000316097 TMEM9BQ9NQ34 198 aa15.11■□□□□ 0.01
SCAMP4-201ENST00000316097 PARP11Q9NR21 331 aa15.11■□□□□ 0.01
SCAMP4-201ENST00000316097 DNAJB11Q9UBS4 358 aa15.11■□□□□ 0.01
SCAMP4-201ENST00000316097 hCG_1809904A0A1W2PP81 198 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 A0A1W2PR64 198 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 A0A1W2PRV1 198 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 HTR3BO95264 441 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 H2BFMP0C1H6 154 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 HLA-DOBP13765 273 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 ADH6P28332 368 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 FOLR3P41439 243 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 C17orf67Q0P5P2 114 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 OR2A2Q6IF42 318 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 ZNF600Q6ZNG1 722 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 SUMF1Q8NBK3 374 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 POC1AQ8NBT0 407 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 ST7LQ8TDW4 575 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 TMEM41AQ96HV5 264 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 OR5B2Q96R09 309 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 A0A0A6YYD4 124 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 C7orf77A4D0Y5 90 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 M0R036 132 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 CLN5O75503 358 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 HKR1P10072 659 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 CRABP1P29762 137 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 ACER2Q5QJU3 275 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 STRADBQ9C0K7 418 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 H3BML4 177 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 SOCS1O15524 211 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 SYT7O43581 403 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 SCGNO76038 276 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 MPIG6BO95866 241 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 OR8U8P0C7N1 319 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 ACKR3P25106 362 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 POLR2HP52434 150 aaKnown RBP15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 C6orf15Q6UXA7 325 aaPredicted RBP15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 ARRDC1Q8N5I2 433 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 SLC26A10Q8NG04 563 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 CT55Q8WUE5 264 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 OIT3Q8WWZ8 545 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 RTBDNQ9BSG5 229 aaPredicted RBP15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 SMIM3Q9BZL3 60 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 PPP4R1LQ9P1A2 415 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 TCFL5Q9UL49 500 aa15.1■□□□□ 0.01
SCAMP4-201ENST00000316097 TMEM14DPA8MWL7 114 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 TAAR5O14804 337 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 MT-ATP6P00846 226 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 IGHV2-70P01814 119 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 PLAC9Q5JTB6 97 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 VAX1Q5SQQ9 334 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 ZNF468Q5VIY5 522 aaPredicted RBP15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 TMEM268Q5VZI3 342 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 TMEM104Q8NE00 496 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 SLC22A8Q8TCC7 542 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 SPACA9Q96E40 222 aaPredicted RBP15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 ZNF700Q9H0M5 742 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 LPAR5Q9H1C0 372 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 RGCCQ9H4X1 137 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 PARD6AQ9NPB6 346 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 CNTRLQ7Z7A1 2325 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 NSG1A0A0A6YYJ2 146 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 EFNA2O43921 213 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 GLRA1P23415 457 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 FPR2P25090 351 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 ZNF93P35789 620 aaPredicted RBP15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 OR2B8PP59922 312 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 FOXF1Q12946 379 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 GRINAQ7Z429 371 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 OR5H2Q8NGV7 314 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 SLC39A7Q92504 469 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 RAB3CQ96E17 227 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 POMT1Q9Y6A1 747 aa15.09■□□□□ 0.01
SCAMP4-201ENST00000316097 OTOGLQ3ZCN5 2332 aa15.08■□□□□ 0.01
SCAMP4-201ENST00000316097 LOC400499M0QZD8 3231 aa15.08■□□□□ 0.01
SCAMP4-201ENST00000316097 SDCBPO00560 298 aaPredicted RBP15.08■□□□□ 0
SCAMP4-201ENST00000316097 PLPP3O14495 311 aa15.08■□□□□ 0
SCAMP4-201ENST00000316097 DXOO77932 396 aaKnown RBP15.08■□□□□ 0
SCAMP4-201ENST00000316097 MT-CO3P00414 261 aa15.08■□□□□ 0
SCAMP4-201ENST00000316097 F10P00742 488 aa15.08■□□□□ 0
SCAMP4-201ENST00000316097 CST4P01036 141 aa15.08■□□□□ 0
SCAMP4-201ENST00000316097 IGHV2-5P01817 119 aa15.08■□□□□ 0
SCAMP4-201ENST00000316097 TTRP02766 147 aa15.08■□□□□ 0
SCAMP4-201ENST00000316097 RAB5AP20339 215 aa15.08■□□□□ 0
SCAMP4-201ENST00000316097 GLP1RP43220 463 aa15.08■□□□□ 0
SCAMP4-201ENST00000316097 C1orf140Q5VVS0 124 aa15.08■□□□□ 0
SCAMP4-201ENST00000316097 ADAM5Q6NVV9 412 aa15.08■□□□□ 0
SCAMP4-201ENST00000316097 TCTEX1D2Q8WW35 142 aa15.08■□□□□ 0
SCAMP4-201ENST00000316097 TAAR9Q96RI9 348 aa15.08■□□□□ 0
SCAMP4-201ENST00000316097 BANF2Q9H503 90 aa15.08■□□□□ 0
SCAMP4-201ENST00000316097 FAM86C1Q9NVL1 165 aa15.08■□□□□ 0
SCAMP4-201ENST00000316097 FBXL17Q9UF56 701 aa15.08■□□□□ 0
SCAMP4-201ENST00000316097 PCNX2A6NKB5 2137 aa15.08■□□□□ 0
SCAMP4-201ENST00000316097 RAD51DO75771 328 aa15.08■□□□□ 0
SCAMP4-201ENST00000316097 RD3LP0DJH9 198 aa15.08■□□□□ 0
SCAMP4-201ENST00000316097 RPL12P30050 165 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms